hyginn
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3082b05a0b
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Moved setting default stringsAsFactors to .myProfile.R since it needs to persist
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2020-09-21 14:44:08 +10:00 |
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hyginn
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61a2c01be4
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add options(stringsAsFactors = FALSE) as comment - if needed
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2020-09-21 14:40:04 +10:00 |
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hyginn
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7536473c5d
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Updated MYSPE data and entire workflow. Changed all .RData to .rds
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2020-09-21 14:28:24 +10:00 |
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hyginn
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3d91337e70
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New workflow for Introduction
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2020-09-19 22:31:06 +10:00 |
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hyginn
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37ef655d47
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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hyginn
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89bdd14d1c
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Test for default stringsAsFactors and complain if TRUE
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2020-09-18 08:48:19 +10:00 |
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hyginn
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599f8a3f98
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2020 updates and maintenance
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2020-09-16 16:32:51 +10:00 |
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hyginn
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46a157bb17
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Maintenance
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2019-11-14 22:44:07 -05:00 |
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hyginn
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5b197b8829
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Maintenance
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2019-11-14 22:40:45 -05:00 |
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hyginn
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bae2d33f14
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Prefix Biostrings:: to subseq()
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2019-11-14 22:38:53 -05:00 |
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hyginn
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84aa2dca0b
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prefix function with package name
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2019-11-14 22:12:33 -05:00 |
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hyginn
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cffd803c23
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Use requireNamespace(), <package>::<function>() idiom,
Biocmanager:: - not biocLite()
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2019-01-08 17:11:25 +10:00 |
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hyginn
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8cdbb9f4cc
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myScript.R should not exist in master
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2019-01-08 11:32:39 +10:00 |
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hyginn
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c7393ca287
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cleanup
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2019-01-07 17:51:50 +10:00 |
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hyginn
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64772c5702
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sample data
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2019-01-07 17:51:11 +10:00 |
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hyginn
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6f54293592
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Maintenance updates, and revised set.seed() usage
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2019-01-07 16:17:23 +10:00 |
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hyginn
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2ab162e375
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Maintance: typos, update of prosite URL
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2018-12-02 18:52:36 +10:00 |
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hyginn
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1dd87e7473
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Maintainance fixes and UniProt API change bugfix
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2018-10-30 21:27:42 -04:00 |
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hyginn
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ead20d5f18
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Fixed merge conflict noise
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2018-01-28 18:53:10 -05:00 |
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hyginn
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c17b340b38
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Add material
Merge branch 'master' of https://github.com/hyginn/ABC-units
# Conflicts:
# RPR-GEO2R.R
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2018-01-28 18:49:24 -05:00 |
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hyginn
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c4fed71a7f
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Add section on GPL annotations to RPR-GEO2R
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2018-01-28 18:47:15 -05:00 |
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hyginn
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b17a9e202a
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Add section on GPL annotations to RPR-GEO2R
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2018-01-28 18:23:21 -05:00 |
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hyginn
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359434d863
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Typo
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2017-11-23 07:19:31 -05:00 |
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hyginn
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75c6efe4a6
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variable name typo
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2017-11-23 00:32:13 -05:00 |
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hyginn
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8ac1582514
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TRUE and FALSE were inverted in explanation of masking
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2017-11-22 12:05:02 -05:00 |
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hyginn
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5e4ecbaf6f
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New code - under development
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2017-11-20 19:01:20 -05:00 |
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hyginn
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82841de74a
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Change blockWidth > 60 from error to warning
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2017-11-20 19:00:55 -05:00 |
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hyginn
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a1b5eb7b90
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Correction re. Jeffreys' pseudocounts
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2017-11-20 19:00:23 -05:00 |
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hyginn
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9a987c22be
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Add comment re. failing msaMuscle()
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2017-11-20 18:59:54 -05:00 |
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hyginn
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f747f7896e
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typo
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2017-11-17 23:44:05 -05:00 |
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hyginn
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450aefa119
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New unit
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2017-11-17 23:43:50 -05:00 |
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hyginn
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40b9e6fc04
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update to function <- package::function idiom
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2017-11-16 16:37:53 -05:00 |
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hyginn
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62a1a76558
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Updated logic
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2017-11-16 16:01:56 -05:00 |
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hyginn
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4bbf663eca
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load seqinr
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2017-11-16 14:46:15 -05:00 |
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hyginn
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a58e35f060
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Fixed parsing and added missing logic
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2017-11-16 11:47:53 -05:00 |
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hyginn
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206e2e14bb
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New unit, and update to annotation file logic
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2017-11-14 02:57:13 -05:00 |
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hyginn
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2433bc8652
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fixed annotation errors
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2017-11-14 02:56:39 -05:00 |
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hyginn
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8cb69f2986
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New unit
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2017-11-13 00:51:04 -05:00 |
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hyginn
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93523c6533
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New unit and associated data
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2017-11-12 04:39:00 -05:00 |
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hyginn
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28be433b83
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Added ToDo
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2017-11-12 04:38:15 -05:00 |
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hyginn
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c93b6df235
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Style
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2017-11-12 04:37:53 -05:00 |
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hyginn
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16d96d79f4
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New unit and data
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2017-11-09 23:44:25 -05:00 |
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hyginn
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943dbeba8f
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style fix
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2017-11-09 23:43:48 -05:00 |
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hyginn
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f1e222f4e0
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Bugfixes
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2017-11-03 15:20:16 -04:00 |
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hyginn
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2b6ca615b9
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Merge branch 'master' of https://github.com/hyginn/ABC-units
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2017-11-03 15:19:14 -04:00 |
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hyginn
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67abde8920
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bugfix
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2017-11-03 15:15:46 -04:00 |
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hyginn
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563ae186d0
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bugfix
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2017-11-03 15:08:17 -04:00 |
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hyginn
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1d6170f417
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Updates, and add treedist()
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2017-11-01 23:30:01 -04:00 |
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hyginn
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0da30ec109
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bugfix
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2017-11-01 23:29:30 -04:00 |
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hyginn
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6121323df3
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Correct calculation of empirical p-vale
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2017-11-01 23:29:18 -04:00 |
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