ydeng/bch441-work-abc-units
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
99 Commits 1 Branch 0 Tags
5b197b8829a27b814b13b0050fbae0c66ae02b8d
Go to file
Clone
Open with VS Code Open with VSCodium Open with Intellij IDEA
Download ZIP Download TAR.GZ Download BUNDLE
hyginn 5b197b8829 Maintenance
2019-11-14 22:40:45 -05:00
data
sample data
2019-01-07 17:51:11 +10:00
scripts
prefix function with package name
2019-11-14 22:12:33 -05:00
tests
New unit: RPR-Unit_tests, with sample test file and tests directory
2017-10-15 18:46:42 -04:00
.gitignore
cleanup
2019-01-07 17:51:50 +10:00
.init.R
Changing "YFO" to "MYSPE"
2017-10-03 23:38:48 -04:00
.notes
cleanup
2019-01-07 17:51:50 +10:00
.Rprofile
Install files and folders
2017-08-18 22:04:01 +02:00
.tmp.R
Install files and folders
2017-08-18 22:04:01 +02:00
.utilities.R
Prefix Biostrings:: to subseq()
2019-11-14 22:38:53 -05:00
ABC-addSACCE_APSESproteins.R
Added and updated learning units
2017-09-12 16:09:20 -04:00
ABC-units.R
Updates
2017-09-21 17:50:16 -04:00
ABC-units.Rproj
Install files and folders
2017-08-18 22:04:01 +02:00
BIN-ALI-BLAST.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-ALI-Dotplot.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-ALI-MSA.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-ALI-Optimal_sequence_alignment.R
Maintenance
2019-11-14 22:40:45 -05:00
BIN-ALI-Similarity.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-Data_integration.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-FUNC-Domain_annotation.R
New unit, and update to annotation file logic
2017-11-14 02:57:13 -05:00
BIN-FUNC-Semantic_similarity.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-MYSPE.R
Maintenance updates, and revised set.seed() usage
2019-01-07 16:17:23 +10:00
BIN-PHYLO-Data_preparation.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-PHYLO-Tree_analysis.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-PHYLO-Tree_building.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-PPI-Analysis.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-SEQA-Composition.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-Sequence.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
BIN-Storing_data.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
FND-Genetic_code.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
FND-MAT-Graphs_and_networks.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
FND-STA-Information_theory.R
New code - under development
2017-11-20 19:01:20 -05:00
FND-STA-Probability_distribution.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
FND-STA-Significance.R
Maintenance updates, and revised set.seed() usage
2019-01-07 16:17:23 +10:00
functionTemplate.R
added a non-executing block for test code
2017-10-28 23:07:52 -04:00
README.md
Initial commit
2017-08-18 21:51:33 +02:00
RPR-Biostrings.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
RPR-eUtils_XML.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
RPR-FASTA.R
Maintainance fixes and UniProt API change bugfix
2018-10-30 21:27:42 -04:00
RPR-Genetic_code_optimality.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
RPR-GEO2R.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
RPR-Introduction.R
Fixed typo
2017-10-03 10:40:22 -04:00
RPR-PROSITE_POST.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
RPR-RegEx.R
Maintainance fixes and UniProt API change bugfix
2018-10-30 21:27:42 -04:00
RPR-SX-PDB.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
RPR-UniProt_GET.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
RPR-Unit_testing.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00
scriptTemplate.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00

README.md

ABC-units

A Bioinformatics Course: R modules for learning units

Description
No description provided
Readme 7.6 MiB
Languages
R 100%