4d2c491733
Merge branch 'develop'
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2023-05-03 08:21:42 -05:00
842458f20c
Updated 'Jenkinsfile' to no longer activate environment
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2023-05-03 08:17:34 -05:00
40c8afe68c
Updated 'Jenkinsfile' to conform to new build container usage
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2023-05-03 08:13:18 -05:00
a5b7d2773e
Pipeline no longer fails build if testing step fails
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2023-04-28 21:47:18 +00:00
1ae59d0a8f
Updated system path insertion in 'conf.py'
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2023-04-28 15:54:55 -05:00
d6edc0e317
Changing documentation generation structure
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2023-04-28 15:47:27 -05:00
a8b820523a
Merge branch 'develop'
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2023-04-28 14:29:46 -05:00
cf104c859d
Added some more help to 'README.md'
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2023-04-28 14:29:34 -05:00
ebb27556b5
Merge branch 'develop'
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2023-04-28 14:11:37 -05:00
7bfe49445a
Moved steps and removed 'clean' stage
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2023-04-28 14:11:24 -05:00
f0da142377
Updated documentation publishing title and 'README.md' to link to CI
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2023-04-28 14:10:15 -05:00
4383e36c1f
Removed space in doc title
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2023-04-28 14:01:10 -05:00
cbf32d253b
Added docs cleaning step to pipeline
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2023-04-28 13:56:10 -05:00
adf7473587
Fixed some doc typos
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2023-04-28 13:46:58 -05:00
e942b65ebd
Added '--force' to 'sphinx-apidoc' step
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2023-04-28 13:42:38 -05:00
61149b88b7
Added sphinx to build environment
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2023-04-28 13:32:50 -05:00
47cdd8bc28
Added basic automatic documentation generation
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2023-04-28 13:28:12 -05:00
7e3f43434e
Added documentation
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2023-04-28 12:44:59 -05:00
587c2e753a
'.gitignore' now ignores 'output' directory
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2023-04-28 11:33:22 -05:00
00cedbb181
Created convenience VSCode 'launch.json'
2023-04-28 11:32:35 -05:00
11d5590355
Added another post-installation test step
2023-04-28 11:32:17 -05:00
c34b219306
CLI will now recursively make output directory if needed
2023-04-28 11:31:41 -05:00
6017eadb2c
Clean sequences of line breaks and carriage return
2023-04-28 11:30:23 -05:00
3c5e934c7c
Updated 'Jenkinsfile' to fingerprint generated artifacts
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2023-04-28 11:14:42 -05:00
9eebaa2f91
Added check to 'cli.py' to verify '--behave-as' parameter
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2023-04-28 11:13:37 -05:00
78b4a74bc8
Removed erroneous line from 'cli.py'
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2023-04-28 11:08:51 -05:00
beef3ee6a5
Fixed bug in 'cli.py' regarding argument type
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2023-04-28 11:04:12 -05:00
2f86ec050f
Pipeline now updates environment if possible, otherwise, re-creates it
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2023-04-28 11:02:15 -05:00
51c2bd1f7b
Conda environment creation now has '--force' for pipeline
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2023-04-28 10:58:31 -05:00
515c130146
Replaced 'build' with 'python-build' in 'environment.yml'
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2023-04-28 10:53:14 -05:00
927a8a170a
Removed unused dictionary declaration
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2023-04-28 10:50:55 -05:00
ae3732eba2
Many changes, see details:
...
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Now allow for changing whether alignment is local or global and various scoring parameters
Refactored directory structure
Removed redundant aligned dict pattern for simple iterable
Added unit tests
2023-04-28 10:49:07 -05:00
d42ed83b22
Added 'features' section to README.md
2023-04-28 08:38:55 -05:00
d75a83585c
Merge branch 'master' of https://git.reslate.systems/ydeng/bmlsa and fingerprint archives
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2023-04-28 08:25:38 -05:00
f1fe568818
Added testing of pip installation and archiving
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2023-04-24 09:40:29 -05:00
b9f4c74168
Pipeline now tests the installed command
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2023-04-22 16:20:12 -05:00
59e2dcaa9d
Updated 'README.md'
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2023-04-21 14:34:31 -05:00
1d0da9a675
CI no longer fails on unsuccessful package upload
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2023-04-21 14:33:26 -05:00
f1ceb1438c
Bump version number for pip
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2023-04-21 14:27:33 -05:00
b8fa4b5208
Fixed off by one result output
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2023-04-21 14:14:22 -05:00
50210a884d
Fixed deployed CLI import paths
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2023-04-21 13:55:15 -05:00
2a80c2aea2
Added python project description files
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2023-04-21 11:47:28 -05:00
6b3c9c312e
Added 'Jenkinsfile' and 'environment.yml'
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2023-04-21 11:44:01 -05:00
7f9f9405c3
Removed bad parameter
2023-04-20 15:16:34 -05:00
04f730cacb
Changed alignment library
2023-04-20 12:24:26 -05:00
f22070e8c3
Renamed project
2023-04-20 10:07:39 -05:00
ecd488b851
Added "README.md"
2023-04-20 09:48:36 -05:00
fed4709d79
Initial commit
2023-04-20 09:48:19 -05:00
