2023-04-20 09:48:19 -05:00
2023-04-21 14:14:22 -05:00
2023-04-20 09:48:19 -05:00
2023-04-21 14:27:33 -05:00
2023-04-20 09:48:19 -05:00

BMLSA

A Basic multi local sequence alignment tool using the Biopython implementation of the Smith-Waterman alignment algorithm.

Features

  • Aligns a CSV of short sequences locally to a given reference sequence
  • Outputs in a CSV with old and new positions
  • Selectable parameters for alignment
  • Compatible with broad-range of input CSV formats
  • Automatically align with all sequences in reference FASTA
  • All produced output is human readable!
Description
Basic multi local sequence alignment tool
Readme 135 KiB
Languages
Python 100%