Removed bad parameter

2023-04-20 15:16:34 -05:00
parent 04f730cacb
commit 7f9f9405c3
1 changed files with 1 additions and 1 deletions
--- a/bmlsa/aligner.py
+++ b/bmlsa/aligner.py
@@ -6,7 +6,7 @@ from datatypes import AlignedSequence

 def protein_align_many_to_one_ssw(sequence: str, queries: dict[str, AlignedSequence]):
    annotation_pairs = {}
-    aligner = PairwiseAligner(one_alignment_only=True)
+    aligner = PairwiseAligner()
    aligner.mode = "local"
    aligner.substitution_matrix = substitution_matrices.load("BLOSUM62")
    aligner.extend_gap_score = -1