hyginn
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67abde8920
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bugfix
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2017-11-03 15:15:46 -04:00 |
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hyginn
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1d6170f417
|
Updates, and add treedist()
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2017-11-01 23:30:01 -04:00 |
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hyginn
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0da30ec109
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bugfix
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2017-11-01 23:29:30 -04:00 |
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hyginn
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6121323df3
|
Correct calculation of empirical p-vale
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2017-11-01 23:29:18 -04:00 |
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hyginn
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f6983b142a
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Update
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2017-11-01 23:28:12 -04:00 |
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hyginn
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8fe794cf33
|
add PHYLO units
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2017-11-01 09:44:24 -04:00 |
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hyginn
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7cc2853d00
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add fetchMSAmotif() function
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2017-11-01 09:43:48 -04:00 |
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hyginn
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d3c42da51b
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bugfix (old code carryover)
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2017-10-30 17:24:09 -04:00 |
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hyginn
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373da689df
|
bugfixes
|
2017-10-29 22:19:19 -04:00 |
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hyginn
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553b042f20
|
MSA unit, and supporting files
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2017-10-28 23:09:21 -04:00 |
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hyginn
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044990d1c9
|
coding style:
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2017-10-28 23:08:31 -04:00 |
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hyginn
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066be49970
|
added a non-executing block for test code
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2017-10-28 23:07:52 -04:00 |
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hyginn
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4479fa2d4d
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Added package information code after every library() call.
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2017-10-28 23:07:04 -04:00 |
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hyginn
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e57db9e9a0
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Added data files for PSI-BLAST unit, updated some other JSONs
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2017-10-23 21:00:39 -04:00 |
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hyginn
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bc4afc97aa
|
Updates for BIN-ALI-BLAST
|
2017-10-23 12:37:09 -04:00 |
|
hyginn
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59ab6c573f
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New unit and associated FASTA files
|
2017-10-22 23:39:12 -04:00 |
|
hyginn
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932c81c8d1
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New unit
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2017-10-22 23:38:32 -04:00 |
|
hyginn
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50bf936bd5
|
Data for RPR-SX-PDB unit
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2017-10-21 21:02:13 -04:00 |
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hyginn
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483386bf3b
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Live version of RPR-SX-PDB.R
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2017-10-21 21:01:29 -04:00 |
|
hyginn
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46285224d6
|
New unit RPR-Biostrings.R
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2017-10-21 21:00:55 -04:00 |
|
hyginn
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b748c1264c
|
Add selectPDBrep() function to select random, representative PDB IDs
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2017-10-21 21:00:18 -04:00 |
|
hyginn
|
d28536b395
|
Data files for ABC-INT-Mutation_impact integrator unit
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2017-10-17 07:32:01 -04:00 |
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hyginn
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a942bef91e
|
New unit
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2017-10-15 23:40:13 -04:00 |
|
hyginn
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05958349cf
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New unit: RPR-Unit_tests, with sample test file and tests directory
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2017-10-15 18:46:42 -04:00 |
|
hyginn
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c148d95071
|
updates to biCode() function - handle NA and short input
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2017-10-15 18:44:06 -04:00 |
|
hyginn
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153e7dcf00
|
Update: FASTA files may contain gap and stop characters
|
2017-10-14 18:26:16 -04:00 |
|
hyginn
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d9e7813d27
|
Code and data for RPR-FASTA
|
2017-10-14 18:25:46 -04:00 |
|
hyginn
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edb245f818
|
Comments on "incomplete final line" warning
|
2017-10-12 21:50:30 -04:00 |
|
hyginn
|
bd79626a3d
|
clarifications
|
2017-10-12 15:14:46 -04:00 |
|
hyginn
|
98cd17bfe0
|
New unit code
|
2017-10-12 15:11:38 -04:00 |
|
hyginn
|
0c069a66ca
|
add ID mapping instructions
|
2017-10-09 17:32:07 -04:00 |
|
hyginn
|
32a45fc059
|
Add UniProtIDmap() function
|
2017-10-08 15:59:56 -04:00 |
|
hyginn
|
59a1341796
|
New unit
|
2017-10-08 15:59:36 -04:00 |
|
hyginn
|
96e559429d
|
S. cerevisae cell cycle subnetwork edge-list
|
2017-10-07 13:57:55 -04:00 |
|
hyginn
|
7ed5309901
|
Supporting script to create a cell cycle subset from STRING data. Used for FND-MAT-Graphs_and_networks deliverables
|
2017-10-07 11:52:33 -04:00 |
|
hyginn
|
f2e1f4ca83
|
First live version
|
2017-10-07 11:51:08 -04:00 |
|
hyginn
|
27dd73664b
|
add httr and xml2 package, add scripted data download functions
|
2017-10-06 08:51:12 -04:00 |
|
hyginn
|
b33feed50a
|
Add code for scripting data download unit
|
2017-10-06 08:49:43 -04:00 |
|
hyginn
|
4fb2506e58
|
refactor biCode to bring it in line with current coding standards
|
2017-10-06 08:49:10 -04:00 |
|
hyginn
|
9ac45565f4
|
Changing "YFO" to "MYSPE"
|
2017-10-03 23:38:48 -04:00 |
|
hyginn
|
a83f2166a5
|
Fixed typo
|
2017-10-03 10:40:22 -04:00 |
|
hyginn
|
38e5822ac7
|
New unit - regex practice and sample file
|
2017-10-02 14:51:11 -04:00 |
|
hyginn
|
64dfed2daf
|
Update: chartr()
|
2017-10-02 14:50:33 -04:00 |
|
hyginn
|
e34460cd44
|
Update version
|
2017-09-29 12:26:22 -04:00 |
|
hyginn
|
e1dbd1d268
|
update function to remove FASTA headers (line-break terminated substrings that begin with a ">")
|
2017-09-29 12:25:00 -04:00 |
|
hyginn
|
3b5e65aa8d
|
New unit
|
2017-09-29 12:23:57 -04:00 |
|
hyginn
|
8462b7d336
|
Genetic code unit and data
|
2017-09-28 09:19:59 -04:00 |
|
hyginn
|
131ec842e4
|
JSON data sources
|
2017-09-25 01:32:41 -04:00 |
|
hyginn
|
6cb8fa16c9
|
Obsolete
|
2017-09-25 01:32:05 -04:00 |
|
hyginn
|
95accd9608
|
new scripts
|
2017-09-25 01:31:40 -04:00 |
|