515c130146 
					 
					
						
						
							
							Replaced 'build' with 'python-build' in 'environment.yml'  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head There was a failure building this commit 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-28 10:53:14 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						927a8a170a 
					 
					
						
						
							
							Removed unused dictionary declaration  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head There was a failure building this commit 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-28 10:50:55 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						ae3732eba2 
					 
					
						
						
							
							Many changes, see details:  
						
						 
						
						... 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head There was a failure building this commit 
				
			 
		
		
	 
 
	 
						
						Now allow for changing whether alignment is local or global and various scoring parameters
Refactored directory structure
Removed redundant aligned dict pattern for simple iterable
Added unit tests 
						
						
					 
					
						2023-04-28 10:49:07 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						d42ed83b22 
					 
					
						
						
							
							Added 'features' section to README.md  
						
						 
						
						
						
						
					 
					
						2023-04-28 08:38:55 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						f1fe568818 
					 
					
						
						
							
							Added testing of pip installation and archiving  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head This commit looks good 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-24 09:40:29 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						59e2dcaa9d 
					 
					
						
						
							
							Updated 'README.md'  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head This commit looks good 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-21 14:34:31 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						1d0da9a675 
					 
					
						
						
							
							CI no longer fails on unsuccessful package upload  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head This commit looks good 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-21 14:33:26 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						f1ceb1438c 
					 
					
						
						
							
							Bump version number for pip  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head This commit looks good 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-21 14:27:33 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						b8fa4b5208 
					 
					
						
						
							
							Fixed off by one result output  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head There was a failure building this commit 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-21 14:14:22 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						50210a884d 
					 
					
						
						
							
							Fixed deployed CLI import paths  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head This commit looks good 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-21 13:55:15 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						2a80c2aea2 
					 
					
						
						
							
							Added python project description files  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head This commit looks good 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-21 11:47:28 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						6b3c9c312e 
					 
					
						
						
							
							Added 'Jenkinsfile' and 'environment.yml'  
						
						 
						
						
	
		
			
	 
		 
	
	
		
	
	
		
			
				
	 
				ydeng/bmlsa/pipeline/head There was a failure building this commit 
				
			 
		
		
	 
 
	 
						
						
					 
					
						2023-04-21 11:44:01 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						7f9f9405c3 
					 
					
						
						
							
							Removed bad parameter  
						
						 
						
						
						
						
					 
					
						2023-04-20 15:16:34 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						04f730cacb 
					 
					
						
						
							
							Changed alignment library  
						
						 
						
						
						
						
					 
					
						2023-04-20 12:24:26 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						f22070e8c3 
					 
					
						
						
							
							Renamed project  
						
						 
						
						
						
						
					 
					
						2023-04-20 10:07:39 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						ecd488b851 
					 
					
						
						
							
							Added "README.md"  
						
						 
						
						
						
						
					 
					
						2023-04-20 09:48:36 -05:00  
					
					
						 
						
						
							
							
							
							
							
							 
						
					 
				 
			
				
					
						
					 
					
						
						
							
						
						fed4709d79 
					 
					
						
						
							
							Initial commit  
						
						 
						
						
						
						
					 
					
						2023-04-20 09:48:19 -05:00