hyginn
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4b2bab0f12
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Class session notes for 2021-10-12
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2021-10-19 22:44:34 +02:00 |
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hyginn
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bb2e2a4c85
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Revert to canonical install.packages("name") idiom
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2021-10-12 12:17:53 +02:00 |
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hyginn
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6939bd1e88
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New script
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2021-10-12 12:17:12 +02:00 |
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hyginn
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c9b939b096
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Typos
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2021-10-05 23:48:34 +02:00 |
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hyginn
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ce78612a3b
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New script - illustrating the pipe
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2021-10-05 22:53:41 +02:00 |
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hyginn
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9603fbede8
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Add troubleshooting hints via errText[[...]]
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2021-10-04 22:53:06 +02:00 |
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hyginn
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2e65e18f22
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Unlocked (and updated)
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2021-09-18 12:54:46 -04:00 |
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hyginn
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5fa5dd9ff7
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New retrieval logic
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2021-09-18 12:36:46 -04:00 |
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hyginn
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c3ca448997
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Update MYSPE datasets
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2021-09-18 12:36:26 -04:00 |
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hyginn
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86d619ad51
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rewrite getMYSPE()
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2021-09-18 12:00:51 -04:00 |
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hyginn
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9143b784e9
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Locked out - Updates needed for 2021
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2021-09-16 01:29:19 -04:00 |
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hyginn
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2956ba29b5
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2021 minimal maintenance
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2021-09-16 01:16:22 -04:00 |
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hyginn
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dd537460df
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RNG seems to have changed - update a number
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2021-09-16 01:05:34 -04:00 |
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hyginn
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678b70ed68
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First minor updates 2021
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2021-09-16 00:54:29 -04:00 |
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hyginn
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44209e6495
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Add a line for example usage
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2021-09-16 00:53:52 -04:00 |
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hyginn
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65193f1e54
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Minor 2021 Maintenance
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2021-09-16 00:53:23 -04:00 |
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hyginn
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5c577eb8d6
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Small 2021 Updates
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2021-09-16 00:52:14 -04:00 |
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hyginn
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648925525f
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style update
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2021-09-15 20:54:29 -04:00 |
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hyginn
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6714171102
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typo
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2021-09-15 20:12:10 -04:00 |
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hyginn
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02ea110fe2
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bugfix - wrong function name
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2020-11-13 15:38:08 +10:00 |
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hyginn
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33ba40a252
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Bugfix in AddProtein - paste() returns deparsed expression for single-column lists...
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2020-11-09 22:02:27 +10:00 |
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hyginn
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39b1da5897
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updates to use of "data" in nls()/nlrob()
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2020-11-05 20:34:21 +10:00 |
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hyginn
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1f2ec21546
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Extensive additions on Poisson and Binomial distributions and NLS fits
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2020-11-03 21:24:56 +10:00 |
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hyginn
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7bbd19078f
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Clarifications
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2020-11-03 21:22:08 +10:00 |
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hyginn
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7c19559839
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one more palette
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2020-10-21 06:14:16 +10:00 |
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hyginn
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08e1803c44
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Update vector ID's for betweenness centrality
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2020-10-21 06:13:36 +10:00 |
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hyginn
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052e148999
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Removed lock-out message
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2020-10-14 06:18:07 +10:00 |
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hyginn
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55a0d18a66
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patch a problem where jsonlite:: oversimplifies from single entries to array, rather than list.
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2020-10-13 22:38:47 +10:00 |
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hyginn
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d2fffdf0b8
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Add code for shared protein data import
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2020-10-13 22:37:31 +10:00 |
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hyginn
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5524832a75
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bugfix: wrong iterator
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2020-10-13 21:45:14 +10:00 |
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hyginn
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a50688e0d0
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bugfix: jsonlite::fromJSON() chokes on a blank
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2020-10-13 20:35:45 +10:00 |
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hyginn
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804e3a73b7
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bugfix: import all taxonomy IDs as integer
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2020-10-13 20:33:04 +10:00 |
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hyginn
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0541612e0b
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Bugfixes
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2020-10-13 20:27:56 +10:00 |
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hyginn
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307aad556e
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remove duplicate annotation
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2020-10-13 20:26:17 +10:00 |
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hyginn
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4d071cf8d5
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Add code and utility functions for database export of protein annotations to JSON - towards sharing annotations on the Student Wiki Public page
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2020-10-13 16:08:35 +10:00 |
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hyginn
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3bee83495f
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add cex examples
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2020-10-12 09:18:10 +10:00 |
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hyginn
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0c395a1c83
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style
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2020-10-12 09:17:09 +10:00 |
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hyginn
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c064b34000
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add sealKey()
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2020-10-12 09:16:52 +10:00 |
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hyginn
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a590e6d9c7
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New plotting reference and associated integrated dataset
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2020-10-06 23:37:29 +10:00 |
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hyginn
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31c519be9f
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Bugfix: called the wrong function on ENSPsel in l. 220
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2020-10-04 14:11:13 +10:00 |
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hyginn
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285c0db8a5
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BUGFIX: variable was tested before being loaded
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2020-10-03 08:57:03 +10:00 |
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hyginn
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e0ff45fe94
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TBC
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2020-10-02 21:15:34 +10:00 |
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hyginn
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efb52f636d
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specify package when attaching BLOSUM62 - don't assume Biostrings has been loaded.
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2020-10-02 20:59:29 +10:00 |
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hyginn
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152d01273f
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data in ./myScripts/
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2020-10-02 18:50:36 +10:00 |
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hyginn
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3173aec119
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srsly: ./myScripts/ !
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2020-10-02 18:38:01 +10:00 |
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hyginn
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62cb8e42c1
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put data in ./myScripts/
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2020-10-02 18:32:29 +10:00 |
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hyginn
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5ff4b3f7cb
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File should be in ./myScripts/...
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2020-10-02 18:31:06 +10:00 |
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hyginn
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e974fbdb10
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add jsonlite:: to fromjJSON() in code sample
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2020-10-02 18:27:59 +10:00 |
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hyginn
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d38092f08a
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mRNA for Mutation-effect IA: controls
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2020-10-01 18:19:59 +10:00 |
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hyginn
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8839248362
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Reorganized proportional plots into a "further reading" section; added nested-box, and sankey plot visualization of proportions. Introduced plotly.
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2020-10-01 18:18:51 +10:00 |
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