ydeng/bch441-work-abc-units
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

srsly: ./myScripts/ !

Browse Source
This commit is contained in:
hyginn 2020-10-02 18:38:01 +10:00
parent 62cb8e42c1
commit 3173aec119
1 changed files with 5 additions and 5 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

10
BIN-ALI-Optimal_sequence_alignment.R
View File

@ -269,10 +269,10 @@ aliApses@subject@range@start + aliApses@subject@range@width - 1
#
#
# You DON'T already have a file called "<MYSPE>-Annotations.json" in the
# ./data/ directory:
# ./myScripts/ directory:
#
# - Make a copy of the file "./data/refAnnotations.json" and put it in your
# project directory.
# myScripts/ directory.
#
# - Give it a name that is structured like "<MYSPE>-Annotations.json" - e.g.
# if MYSPE is called "Crptycoccus neoformans", your file should be called
@ -297,7 +297,7 @@ aliApses@subject@range@start + aliApses@subject@range@width - 1
#
## - Validate your file online at https://jsonlint.com/
#
# - Update your "makeProteinDB.R" script to load your new
# - Update your "./myScripts/makeProteinDB.R" script to load your new
# annotation when you recreate the database. Open the script in the
# RStudio editor, and add the following command at the end:
#
@ -314,7 +314,7 @@ aliApses@subject@range@start + aliApses@subject@range@width - 1
#
#
# You DO already have a file called "<MYSPE>-Annotations.json" in the
# ./data/ directory:
# ./myScripts/ directory:
#
# - Open the file in the RStudio editor.
#
@ -338,7 +338,7 @@ aliApses@subject@range@start + aliApses@subject@range@width - 1
#
# - source() your database creation script:
#
# source("makeProteinDB.R")
# source("./myScripts/makeProteinDB.R")
#
# This should run without errors or warnings. If it doesn't work and you
# can't figure out quickly what's happening, ask on the mailing list for