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File should be in ./myScripts/...

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hyginn 2020-10-02 18:31:06 +10:00
parent e974fbdb10
commit 5ff4b3f7cb
1 changed files with 5 additions and 5 deletions
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10
BIN-ALI-Optimal_sequence_alignment.R
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@ -9,7 +9,7 @@
# Author: Boris Steipe (boris.steipe@utoronto.ca)
#
# Versions:
# 1.7.1 add jsonlite:: to fromjJSON() in code sample
# 1.7.1 add jsonlite:: to fromjJSON() in code sample and ./myScripts/
# 1.7 2020 updates
# 1.6 Maintenance
# 1.5 Change from require() to requireNamespace(),
@ -37,7 +37,7 @@
#TOC> ==========================================================================
#TOC>
#TOC>
#TOC> Section Title Line
#TOC> --------------------------------------------------------------------------
#TOC> 1 Prepare 57
@ -50,7 +50,7 @@
#TOC> 4.1.1 If you HAVE NOT done the BIN-FUNC-Annotation unit 268
#TOC> 4.1.2 If you HAVE done the BIN-FUNC-Annotation unit 313
#TOC> 4.2 Execute and Validate 337
#TOC>
#TOC>
#TOC> ==========================================================================
@ -302,7 +302,7 @@ aliApses@subject@range@start + aliApses@subject@range@width - 1
# RStudio editor, and add the following command at the end:
#
# myDB <- dbAddAnnotation(myDB,
# jsonlite::fromJSON("<MYSPE>-Annotations.json"))
# jsonlite::fromJSON("./myScripts/<MYSPE>-Annotations.json"))
# ^^^^^^^
# edit this!
# - save and close the file.
@ -310,7 +310,7 @@ aliApses@subject@range@start + aliApses@subject@range@width - 1
# Then SKIP the next section.
#
#
# === 4.1.2 If you HAVE done the BIN-FUNC-Annotation unit
# === 4.1.2 If you HAVE done the BIN-FUNC-Annotation unit
#
#
# You DO already have a file called "<MYSPE>-Annotations.json" in the