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11 Commits 5 Branches 23 Tags
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11 Commits

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Author SHA1 Message Date
Harrison Deng
b893d853a7 Changing pipeline to use pip container instead of homebrew 2025-01-09 07:43:20 +00:00
Harrison Deng
9b8e448512 Completed updating CLI to be more organized with bettert error messages 2025-01-09 07:39:18 +00:00
Harrison Deng
42d0f56b18 Moved to a general BIGSdb implementation
Updated tests

Removed ABIF UI for the time being

Began updating CLI
2025-01-08 21:32:10 +00:00
Harrison Deng
645357ac58 Added unit tests for pubMLST MLST profiling 2025-01-08 17:34:30 +00:00
Harrison Deng
424beeb559 Refactored CLI naming 2025-01-08 16:55:55 +00:00
Harrison Deng
d580402523 began adding PubMLST support 2025-01-08 16:54:57 +00:00
Harrison Deng
ad28d9bf20 Added additional test for fully automatic typing based on sequence 2025-01-08 16:31:06 +00:00
Harrison Deng
c3a492fa8f restructured MLST profiling classes 2025-01-08 16:24:42 +00:00
Harrison Deng
e93296705d Removed corresponding test 2025-01-08 15:15:32 +00:00
Harrison Deng
e9ffab5526 Removed unused code 2025-01-08 15:15:21 +00:00
Harrison Deng
02985d5e37 Copied over most code from another of my projects 2025-01-08 15:14:06 +00:00
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