18 lines
931 B
Markdown
18 lines
931 B
Markdown
[](https://ci.reslate.systems/job/ydeng/job/bmlsa/job/master/)
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# BMLSA
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A Basic multi local sequence alignment tool using the Biopython implementation of the Smith-Waterman alignment algorithm.
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## Features
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- Aligns a CSV of short sequences locally to a given reference sequence
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- Outputs in a CSV with old and new positions
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- Selectable parameters for alignment
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- Compatible with broad-range of input CSV formats
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- Automatically align with all sequences in reference FASTA
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- All produced output is human readable!
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## More Information
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For all live downloadable artifacts, build statuses, unit test results, and documentation, check out the continuous integration page for the [master branch](https://ci.reslate.systems/job/ydeng/job/bmlsa/job/master/) ([development branch](https://ci.reslate.systems/job/ydeng/job/bmlsa/job/develop/)). |