modvcfsamples

Author	SHA1	Message	Date
Harrison Deng	58ea9ed2d0	Added untested '-p' option. Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-28 14:19:53 +00:00
Harrison Deng	2d1d69f95f	Added automatic sample name replacement Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-28 05:51:52 +00:00
Harrison Deng	02f52560eb	Bumped version number All checks were successful ydeng/modvcfsamples/pipeline/head This commit looks good Details	2023-06-27 20:26:48 +00:00
Harrison Deng	9245b3f68e	Fixed '--only' issue Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-27 20:20:59 +00:00
Harrison Deng	c25f4ab9a1	Updated the 'README.md' All checks were successful ydeng/modvcfsamples/pipeline/head This commit looks good Details	2023-06-27 14:40:33 +00:00
Harrison Deng	565d778907	Merge branch 'main' of https://git.reslate.systems/ydeng/modvcfsamples All checks were successful ydeng/modvcfsamples/pipeline/head This commit looks good Details	2023-06-27 14:22:36 +00:00
Harrison Deng	4d757e8a8d	Added CLI test in 'Jenkinsfile' All checks were successful ydeng/modvcfsamples/pipeline/head This commit looks good Details	2023-06-27 14:19:06 +00:00
Harrison Deng	8cd09bfb41	Updated pipeline and formatted code All checks were successful ydeng/modvcfsamples/pipeline/head This commit looks good Details Pipeline now looks for correct unit test file	2023-06-27 14:15:03 +00:00
Harrison Deng	58adf3efe8	Added required test resource Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-27 14:03:33 +00:00
Harrison Deng	f1aaaddc0c	Changed build environment and project metadata Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details Now includes 'vcfpy' instead of 'pyvcf'	2023-06-27 13:59:14 +00:00
Harrison Deng	7bae01b1af	Implemented normalizing genotype Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-27 06:15:32 +00:00
Harrison Deng	6449b0b666	Update 'environment.yml' Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-27 06:14:43 +00:00
Harrison Deng	08ba073ef9	Tested and completed adding call sample filtering Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-26 21:07:55 +00:00
Harrison Deng	515d790844	Basic filtering system and tests completed Some checks failed ydeng/modvcfsamples/pipeline/head There was a failure building this commit Details	2023-06-26 17:20:40 +00:00
Harrison Deng	f2bdbaa0b0	Initial commit	2023-06-22 16:35:31 +00:00

15 Commits