Added all resources required for a Jenkins pipeline

Jenkinsfile

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+pipeline {
+    agent any
+    stages {
+        stage("clean") {
+            steps {
+                sh 'rm -rf ./dist/*'
+            }
+        }
+        stage("install") {
+            steps {
+                sh 'mamba env update --file environment.yml'
+                sh 'echo "mamba activate filterfasta" >> ~/.bashrc'
+            }
+        }
+        stage("build") {
+            steps {
+                sh "python -m build"
+            }
+        }
+        stage("test") {
+            steps {
+                sh "pip install dist/*.whl"
+            }
+        }
+        stage("publish") {
+            when {
+                branch '**/master'
+            }
+            steps {
+                withCredentials([usernamePassword(credentialsId: 'rs-git-package-registry-ydeng', passwordVariable: 'PASS', usernameVariable: 'USER')]) {
+                    sh "python -m twine upload --repository-url https://git.reslate.systems/api/packages/${USER}/pypi -u ${USER} -p ${PASS} --non-interactive --disable-progress-bar --verbose dist/*"
+                }
+            }
+        }
+    }
+}

environment.yml

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+name: filterfasta
+channels:
+  - conda-forge
+dependencies:
+  - build=0.7
+  - pytest=7
+  - twine=4
+  - biopython=1.81
+  - python=3.11

pyproject.toml

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+[build-system]
+build-backend = "setuptools.build_meta"
+requires = ["setuptools", "wheel"]

setup.cfg

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+[metadata]
+name = filterfasta
+version = 0.0.1
+
+[options]
+packages = filterfasta
+
+[options.entry_points]
+console_scripts =
+    filterfasta = filterfasta.filterfasta:main

setup.py

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+from setuptools import setup
+
+setup()