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data
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Removed vacous blanks from spacing lines
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2020-09-24 18:45:47 +10:00 |
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myScripts
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2020 updates and maintenance
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2020-09-16 16:32:51 +10:00 |
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scripts
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Update PPI-Analysis assets and code
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2020-09-23 20:47:26 +10:00 |
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tests
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New unit: RPR-Unit_tests, with sample test file and tests directory
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2017-10-15 18:46:42 -04:00 |
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.gitignore
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cleanup
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2019-01-07 17:51:50 +10:00 |
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.myProfile.R
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update process for moving .myProfile.R
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2020-09-21 14:54:30 +10:00 |
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.notes
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cleanup
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2019-01-07 17:51:50 +10:00 |
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.Rprofile
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validate ./scripts/myProfile, and automatically set MYSPE
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2020-09-24 19:47:32 +10:00 |
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.tmp.R
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New workflow for Introduction
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2020-09-19 22:31:06 +10:00 |
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.utilities.R
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add constants AAVALID; NUCVALID, NUCAMBIG. add AACOLS; add validateFA(); readFASTA; writeFASTA.
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2020-09-24 18:43:44 +10:00 |
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ABC-addSACCE_APSESproteins.R
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Added and updated learning units
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2017-09-12 16:09:20 -04:00 |
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ABC-units.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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ABC-units.Rproj
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Install files and folders
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2017-08-18 22:04:01 +02:00 |
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BIN-ALI-BLAST.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-ALI-Dotplot.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-ALI-MSA.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-ALI-Optimal_sequence_alignment.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-ALI-Similarity.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-Data_integration.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-FUNC-Domain_annotation.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-FUNC-Semantic_similarity.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-MYSPE.R
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Set to active, and tweak subtitle
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2020-09-21 15:23:27 +10:00 |
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BIN-PHYLO-Data_preparation.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-PHYLO-Tree_analysis.R
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Updated MYSPE data and entire workflow. Changed all .RData to .rds
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2020-09-21 14:28:24 +10:00 |
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BIN-PHYLO-Tree_building.R
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Updated MYSPE data and entire workflow. Changed all .RData to .rds
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2020-09-21 14:28:24 +10:00 |
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BIN-PPI-Analysis.R
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Update PPI-Analysis assets and code
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2020-09-23 20:47:26 +10:00 |
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BIN-SEQA-Composition.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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BIN-Sequence.R
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Maintenace, and add a Fibonacci-sequence example
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2020-09-23 23:21:46 +10:00 |
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BIN-Storing_data.R
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set to active and update submission tasks
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2020-09-21 21:35:16 +10:00 |
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FND-Genetic_code.R
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Maintenance
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2020-09-24 08:55:14 +10:00 |
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FND-MAT-Graphs_and_networks.R
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Maintenance
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2020-09-23 13:00:38 +10:00 |
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FND-STA-Information_theory.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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FND-STA-Probability_distribution.R
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Update PPI-Analysis assets and code
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2020-09-23 20:47:26 +10:00 |
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FND-STA-Significance.R
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Maintenance and sample solutions
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2020-09-23 06:07:40 +10:00 |
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functionTemplate.R
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added a non-executing block for test code
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2017-10-28 23:07:52 -04:00 |
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README.md
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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RPR-Biostrings.R
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Updated MYSPE data and entire workflow. Changed all .RData to .rds
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2020-09-21 14:28:24 +10:00 |
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RPR-eUtils_XML.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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RPR-FASTA.R
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Major refactoring to simplify logic and clean code
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2020-09-24 18:45:22 +10:00 |
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RPR-Genetic_code_optimality.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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RPR-GEO2R.R
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Updated MYSPE data and entire workflow. Changed all .RData to .rds
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2020-09-21 14:28:24 +10:00 |
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RPR-Introduction.R
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New workflow for Introduction
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2020-09-19 22:31:06 +10:00 |
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RPR-PROSITE_POST.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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RPR-RegEx.R
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2020 Maintenance
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2020-09-22 21:02:13 +10:00 |
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RPR-SX-PDB.R
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stylisitc updates
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2020-09-22 13:02:29 +10:00 |
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RPR-UniProt_GET.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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RPR-Unit_testing.R
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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scriptTemplate.R
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Use requireNamespace(), <package>::<function>() idiom,
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2019-01-08 17:11:25 +10:00 |
