ydeng/bch441-work-abc-units
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
122 Commits 1 Branch 0 Tags
76b18a8a35c96e4b822605a7b9cf3765248ef598
Go to file
Clone
Open with VS Code Open with VSCodium Open with Intellij IDEA
Download ZIP Download TAR.GZ Download BUNDLE
hyginn 76b18a8a35 Update PPI-Analysis assets and code
2020-09-23 20:47:26 +10:00
data
Update PPI-Analysis assets and code
2020-09-23 20:47:26 +10:00
myScripts
2020 updates and maintenance
2020-09-16 16:32:51 +10:00
scripts
Update PPI-Analysis assets and code
2020-09-23 20:47:26 +10:00
tests
New unit: RPR-Unit_tests, with sample test file and tests directory
2017-10-15 18:46:42 -04:00
.gitignore
cleanup
2019-01-07 17:51:50 +10:00
.myProfile.R
update process for moving .myProfile.R
2020-09-21 14:54:30 +10:00
.notes
cleanup
2019-01-07 17:51:50 +10:00
.Rprofile
update process for moving .myProfile.R
2020-09-21 14:54:30 +10:00
.tmp.R
New workflow for Introduction
2020-09-19 22:31:06 +10:00
.utilities.R
Update PPI-Analysis assets and code
2020-09-23 20:47:26 +10:00
ABC-addSACCE_APSESproteins.R
Added and updated learning units
2017-09-12 16:09:20 -04:00
ABC-units.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
ABC-units.Rproj
Install files and folders
2017-08-18 22:04:01 +02:00
BIN-ALI-BLAST.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-ALI-Dotplot.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-ALI-MSA.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-ALI-Optimal_sequence_alignment.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-ALI-Similarity.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-Data_integration.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-FUNC-Domain_annotation.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-FUNC-Semantic_similarity.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-MYSPE.R
Set to active, and tweak subtitle
2020-09-21 15:23:27 +10:00
BIN-PHYLO-Data_preparation.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-PHYLO-Tree_analysis.R
Updated MYSPE data and entire workflow. Changed all .RData to .rds
2020-09-21 14:28:24 +10:00
BIN-PHYLO-Tree_building.R
Updated MYSPE data and entire workflow. Changed all .RData to .rds
2020-09-21 14:28:24 +10:00
BIN-PPI-Analysis.R
Update PPI-Analysis assets and code
2020-09-23 20:47:26 +10:00
BIN-SEQA-Composition.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-Sequence.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
BIN-Storing_data.R
set to active and update submission tasks
2020-09-21 21:35:16 +10:00
FND-Genetic_code.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
FND-MAT-Graphs_and_networks.R
Maintenance
2020-09-23 13:00:38 +10:00
FND-STA-Information_theory.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
FND-STA-Probability_distribution.R
Update PPI-Analysis assets and code
2020-09-23 20:47:26 +10:00
FND-STA-Significance.R
Maintenance and sample solutions
2020-09-23 06:07:40 +10:00
functionTemplate.R
added a non-executing block for test code
2017-10-28 23:07:52 -04:00
README.md
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
RPR-Biostrings.R
Updated MYSPE data and entire workflow. Changed all .RData to .rds
2020-09-21 14:28:24 +10:00
RPR-eUtils_XML.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
RPR-FASTA.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
RPR-Genetic_code_optimality.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
RPR-GEO2R.R
Updated MYSPE data and entire workflow. Changed all .RData to .rds
2020-09-21 14:28:24 +10:00
RPR-Introduction.R
New workflow for Introduction
2020-09-19 22:31:06 +10:00
RPR-PROSITE_POST.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
RPR-RegEx.R
2020 Maintenance
2020-09-22 21:02:13 +10:00
RPR-SX-PDB.R
stylisitc updates
2020-09-22 13:02:29 +10:00
RPR-UniProt_GET.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
RPR-Unit_testing.R
2020 updates - deactivate for maintenance
2020-09-18 21:56:30 +10:00
scriptTemplate.R
Use requireNamespace(), <package>::<function>() idiom,
2019-01-08 17:11:25 +10:00

README.md

ABC-units

A Bioinformatics Course: R modules for learning units

Follow the instructions in the learning unit to install your local copy of this R-project.

Description
No description provided
Readme 7.6 MiB
Languages
R 100%