style update
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# Purpose: A Bioinformatics Course:
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# Purpose: A Bioinformatics Course:
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# R code accompanying the RPR-FASTA unit.
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# R code accompanying the RPR-FASTA unit.
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#
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#
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# Version: 1.1.1
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# Version: 1.1.2
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#
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#
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# Date: 2017-10 - 2020-09
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# Date: 2017-10 - 2021-09
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# Author: Boris Steipe (boris.steipe@utoronto.ca)
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# Author: Boris Steipe (boris.steipe@utoronto.ca)
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#
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#
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# Versions:
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# Versions:
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# 1.1.2 style update
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# 1.1.1 bugfix - wrong function name
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# 1.1.1 bugfix - wrong function name
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# 1.1 2020 Maintenance. Rewrite validation logic. Add data
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# 1.1 2020 Maintenance. Rewrite validation logic. Add data
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# to utilities. Define AACOLS
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# to utilities. Define AACOLS
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@ -56,7 +57,8 @@ faMBP1 <- readLines("./data/S288C_YDL056W_MBP1_coding.fsa")
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# The warning is generated because the programmer at the NCBI who implemented
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# The warning is generated because the programmer at the NCBI who implemented
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# the code to write this FASTA file neglected to place a line-break character
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# the code to write this FASTA file neglected to place a line-break character
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# after the last sequence character. While this is not technically incorrect,
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# after the last sequence character. While this is not technically incorrect,
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# it is poor practice.
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# it is poor practice: the resulting file can't be distinguished from one that
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# has been truncated in transmission.
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head(faMBP1)
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head(faMBP1)
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