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hyginn 2020-09-25 21:07:25 +10:00
parent 85d53ae2ee
commit 126f956ea7
2 changed files with 24 additions and 24 deletions
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34
.utilities.R
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@ -26,23 +26,23 @@
#TOC> 1 SCRIPTS TO SOURCE 50 #TOC> 1 SCRIPTS TO SOURCE 50
#TOC> 2 PACKAGES 56 #TOC> 2 PACKAGES 56
#TOC> 3 DATA & CONSTANTS 67 #TOC> 3 DATA & CONSTANTS 67
#TOC> 4 SUPPORT FUNCTIONS 113 #TOC> 4 SUPPORT FUNCTIONS 114
#TOC> 4.01 objectInfo() 116 #TOC> 4.01 objectInfo() 117
#TOC> 4.02 biCode() 144 #TOC> 4.02 biCode() 145
#TOC> 4.03 sameSpecies() 178 #TOC> 4.03 sameSpecies() 179
#TOC> 4.04 validateFA() 198 #TOC> 4.04 validateFA() 199
#TOC> 4.05 readFASTA() 247 #TOC> 4.05 readFASTA() 248
#TOC> 4.06 writeFASTA() 282 #TOC> 4.06 writeFASTA() 283
#TOC> 4.07 pBar() 315 #TOC> 4.07 pBar() 316
#TOC> 4.08 waitTimer() 337 #TOC> 4.08 waitTimer() 338
#TOC> 4.09 fetchMSAmotif() 365 #TOC> 4.09 fetchMSAmotif() 366
#TOC> 4.10 H() (Shannon entropy) 409 #TOC> 4.10 H() (Shannon entropy) 410
#TOC> 5 FUNCTIONS TO CUSTOMIZE ASSIGNMENTS 422 #TOC> 5 FUNCTIONS TO CUSTOMIZE ASSIGNMENTS 423
#TOC> 5.01 seal() 424 #TOC> 5.01 seal() 425
#TOC> 5.02 getMYSPE() 428 #TOC> 5.02 getMYSPE() 429
#TOC> 5.03 selectPDBrep() 437 #TOC> 5.03 selectPDBrep() 438
#TOC> 5.04 selectChi2() 473 #TOC> 5.04 selectChi2() 474
#TOC> 5.05 selectENSP() 486 #TOC> 5.05 selectENSP() 487
#TOC> #TOC>
#TOC> ========================================================================== #TOC> ==========================================================================

6
BIN-ALI-Similarity.R
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@ -33,9 +33,9 @@
#TOC> #TOC>
#TOC> Section Title Line #TOC> Section Title Line
#TOC> ---------------------------------------------- #TOC> ----------------------------------------------
#TOC> 1 Amino Acid Properties 41 #TOC> 1 Amino Acid Properties 43
#TOC> 2 Mutation Data matrix 158 #TOC> 2 Mutation Data matrix 189
#TOC> 3 Background score 199 #TOC> 3 Background score 230
#TOC> #TOC>
#TOC> ========================================================================== #TOC> ==========================================================================