From 126f956ea74e226c72334ca8872140f0b25df711 Mon Sep 17 00:00:00 2001 From: hyginn Date: Fri, 25 Sep 2020 21:07:25 +1000 Subject: [PATCH] update TOC --- .utilities.R | 38 +++++++++++++++++++------------------- BIN-ALI-Similarity.R | 10 +++++----- 2 files changed, 24 insertions(+), 24 deletions(-) diff --git a/.utilities.R b/.utilities.R index f3f5a51..5dde8df 100644 --- a/.utilities.R +++ b/.utilities.R @@ -20,30 +20,30 @@ #TOC> ========================================================================== -#TOC> +#TOC> #TOC> Section Title Line #TOC> ----------------------------------------------------------- #TOC> 1 SCRIPTS TO SOURCE 50 #TOC> 2 PACKAGES 56 #TOC> 3 DATA & CONSTANTS 67 -#TOC> 4 SUPPORT FUNCTIONS 113 -#TOC> 4.01 objectInfo() 116 -#TOC> 4.02 biCode() 144 -#TOC> 4.03 sameSpecies() 178 -#TOC> 4.04 validateFA() 198 -#TOC> 4.05 readFASTA() 247 -#TOC> 4.06 writeFASTA() 282 -#TOC> 4.07 pBar() 315 -#TOC> 4.08 waitTimer() 337 -#TOC> 4.09 fetchMSAmotif() 365 -#TOC> 4.10 H() (Shannon entropy) 409 -#TOC> 5 FUNCTIONS TO CUSTOMIZE ASSIGNMENTS 422 -#TOC> 5.01 seal() 424 -#TOC> 5.02 getMYSPE() 428 -#TOC> 5.03 selectPDBrep() 437 -#TOC> 5.04 selectChi2() 473 -#TOC> 5.05 selectENSP() 486 -#TOC> +#TOC> 4 SUPPORT FUNCTIONS 114 +#TOC> 4.01 objectInfo() 117 +#TOC> 4.02 biCode() 145 +#TOC> 4.03 sameSpecies() 179 +#TOC> 4.04 validateFA() 199 +#TOC> 4.05 readFASTA() 248 +#TOC> 4.06 writeFASTA() 283 +#TOC> 4.07 pBar() 316 +#TOC> 4.08 waitTimer() 338 +#TOC> 4.09 fetchMSAmotif() 366 +#TOC> 4.10 H() (Shannon entropy) 410 +#TOC> 5 FUNCTIONS TO CUSTOMIZE ASSIGNMENTS 423 +#TOC> 5.01 seal() 425 +#TOC> 5.02 getMYSPE() 429 +#TOC> 5.03 selectPDBrep() 438 +#TOC> 5.04 selectChi2() 474 +#TOC> 5.05 selectENSP() 487 +#TOC> #TOC> ========================================================================== diff --git a/BIN-ALI-Similarity.R b/BIN-ALI-Similarity.R index 7b326dc..db750b6 100644 --- a/BIN-ALI-Similarity.R +++ b/BIN-ALI-Similarity.R @@ -30,13 +30,13 @@ #TOC> ========================================================================== -#TOC> +#TOC> #TOC> Section Title Line #TOC> ---------------------------------------------- -#TOC> 1 Amino Acid Properties 41 -#TOC> 2 Mutation Data matrix 158 -#TOC> 3 Background score 199 -#TOC> +#TOC> 1 Amino Acid Properties 43 +#TOC> 2 Mutation Data matrix 189 +#TOC> 3 Background score 230 +#TOC> #TOC> ==========================================================================