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ydeng/autoBIGS.engine
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34 Commits 5 Branches 23 Tags
Commit Graph

14 Commits

Author SHA1 Message Date
Harrison Deng
f20a656f45 Fixed multiple string typing failure handling 2025-01-10 16:00:27 +00:00
Harrison Deng
0c0a2c9d4c Finished adding partial allele matching 2025-01-10 15:25:31 +00:00
Harrison Deng
03fbbe542e allele profiling partial matching works 2025-01-09 21:44:28 +00:00
Harrison Deng
9589761ddd Now tracks failed profilings 2025-01-09 17:27:15 +00:00
Harrison Deng
2843d0d592 Added tests to test continuous MLST despite failure 2025-01-09 17:04:53 +00:00
Harrison Deng
d4f890a150 Added specific tests for BIGSdbIndex 2025-01-09 16:23:42 +00:00
Harrison Deng
2c412c5526 Renamed tests subdirectory to mirror source 2025-01-09 15:00:46 +00:00
Harrison Deng
42d0f56b18 Moved to a general BIGSdb implementation
Updated tests

Removed ABIF UI for the time being

Began updating CLI
2025-01-08 21:32:10 +00:00
Harrison Deng
645357ac58 Added unit tests for pubMLST MLST profiling 2025-01-08 17:34:30 +00:00
Harrison Deng
d580402523 began adding PubMLST support 2025-01-08 16:54:57 +00:00
Harrison Deng
ad28d9bf20 Added additional test for fully automatic typing based on sequence 2025-01-08 16:31:06 +00:00
Harrison Deng
c3a492fa8f restructured MLST profiling classes 2025-01-08 16:24:42 +00:00
Harrison Deng
e93296705d Removed corresponding test 2025-01-08 15:15:32 +00:00
Harrison Deng
02985d5e37 Copied over most code from another of my projects 2025-01-08 15:14:06 +00:00
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