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						2ea2f63f29
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							Pipeline will now only publish to git.reslate.systems on main branch
						
						
						
						
	
		
			
	
		
	
	
		
	
	
		
			
				
	
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						2025-02-26 06:31:53 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						06dbb56c28
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							Revert "Recipe meta.yaml also archived as artifact"
						
						
						
						
						
						
	
		
			
	
		
	
	
		
	
	
		
			
				
	
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						This reverts commit 79fcce8b84. 
						
						
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						2025-02-21 06:34:59 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						79fcce8b84
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							Recipe meta.yaml also archived as artifact
						
						
						
						
	
		
			
	
		
	
	
		
	
	
		
			
				
	
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						2025-02-21 06:22:27 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						f4064f087e
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							Fixed typos in pipeline script
						
						
						
						
	
		
			
	
		
	
	
		
	
	
		
			
				
	
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						2025-02-21 06:12:35 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						576dc303f4
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							Changed requested kubernetes container to be miniforge
						
						
						
						
						
						
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						2025-02-21 05:52:34 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						2822a483e3
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							Initial attempt at switching to a conda based build environment
						
						
						
						
	
		
			
	
		
	
	
		
	
	
		
			
				
	
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						2025-02-21 05:37:56 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						341ca933a3
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							Fixed typo in CI script
						
						
						
						
						
						
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						2025-01-29 17:00:25 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						3e3898334f
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							Began implementing LazyPersistentCachedBIGSdbMLSTProfiler
						
						
						
						
						
						
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						2025-01-27 22:03:49 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						6d0157581f
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							Removed conda environment step for now
						
						
						
						
						
						
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						2025-01-24 21:43:55 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						4bcbfa0c6a
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							Began adding conda steps for automatic PRs to Bioconda
						
						
						
						
						
						
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						2025-01-24 19:33:27 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						1372141b57
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							Fixed typo in Jenkinsfile
						
						
						
						
						
						
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						2025-01-22 20:30:55 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						677c5e1aa8
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							Revert "Reapply "Began preparing for conda deployment""
						
						
						
						
						
						
						
						This reverts commit ade2f3b845. 
						
						
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						2025-01-22 18:29:37 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						53e74af20a
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							Refactoring project name to autoBIGSst.engine
						
						
						
						
						
						
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						2025-01-22 18:24:04 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						ade2f3b845
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							Reapply "Began preparing for conda deployment"
						
						
						
						
						
						
						
						This reverts commit 3bbef9ac3e. 
						
						
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						2025-01-20 19:56:51 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						c2c6d0b016
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							Changed package publishing on git.reslate.systems back to username and password authentication
						
						
						
						
						
						
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						2025-01-20 19:04:44 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						3bbef9ac3e
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							Revert "Began preparing for conda deployment"
						
						
						
						
						
						
						
						This reverts commit fe797be34f. 
						
						
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						2025-01-20 17:52:29 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						660d803c9e
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							Updated to not regenerate build recipe each time during CI
						
						
						
						
						
						
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						2025-01-20 17:28:42 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						cb3aec554e
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							Added git author information as environment variables
						
						
						
						
						
						
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						2025-01-20 17:04:45 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						05e132c066
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							Updated pipeline to refer to python module correctly
						
						
						
						
						
						
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						2025-01-20 16:54:00 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						de36956cc0
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							Updating kubernetes definitions to match CI server
						
						
						
						
						
						
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						2025-01-20 16:26:11 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						fe797be34f
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							Began preparing for conda deployment
						
						
						
						
						
						
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						2025-01-17 21:31:38 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						ab44dfaa48
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							Publish to pypi if it has a release tag
						
						
						
						
						
						
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						2025-01-17 15:13:47 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						bad7dfc3a8
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							Changing all publishing steps to use API keys
						
						
						
						
						
						
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						2025-01-16 21:29:20 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						4fe0f0f287
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							Added stage for publishing to test.pypi.org when the tag a version number.
						
						
						
						
						
						
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						2025-01-16 21:22:49 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						206a105bf9
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							Rermoved publishing branch and tag conditions, publish errors are no longer considered failures
						
						
						
						
						
						
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						2025-01-10 17:59:04 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						ad082b8af6
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							Revert "Always publish on build success"
						
						
						
						
						
						
						
						This reverts commit cc6a7563ca. 
						
						
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						2025-01-10 17:43:14 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						5118a25b6a
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							publish step will now fail if twine upload fails
						
						
						
						
						
						
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						2025-01-10 17:41:42 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						cc6a7563ca
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							Always publish on build success
						
						
						
						
						
						
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						2025-01-10 17:35:58 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						484e31879e
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							Removed test installation step from CI
						
						
						
						
						
						
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						2025-01-10 17:28:25 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						e60dba936c
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							Added a tag name check for publishing
						
						
						
						
						
						
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						2025-01-09 18:32:51 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						7bd28db6d4
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							Updated code coverage to only report on source code
						
						
						
						
						
						
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						2025-01-09 16:51:08 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						1d531aff42
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							Updated CI to only report on automlst and fixed report publishing
						
						
						
						
						
						
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						2025-01-09 16:08:30 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						8febfad282
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							Added publishing of coverage results
						
						
						
						
						
						
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						2025-01-09 15:55:39 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						42bcfcf61d
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							Added coverage tracking
						
						
						
						
						
						
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						2025-01-09 15:54:22 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						b32a522e39
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							Removed python version selector in CI for test step
						
						
						
						
						
						
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						2025-01-09 07:52:31 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						e3047d60d7
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							Removed version selector for python
						
						
						
						
						
						
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						2025-01-09 07:45:19 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						b893d853a7
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							Changing pipeline to use pip container instead of homebrew
						
						
						
						
						
						
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						2025-01-09 07:43:20 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						02985d5e37
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							Copied over most code from another of my projects
						
						
						
						
						
						
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						2025-01-08 15:14:06 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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