restructured MLST profiling classes

2025-01-08 16:24:42 +00:00
parent e93296705d
commit c3a492fa8f
9 changed files with 138 additions and 11 deletions
--- a/src/automlst/engine/data/genomics.py
+++ b/src/automlst/engine/data/genomics.py
@@ -20,8 +20,7 @@ class AnnotatedString(NamedString):
    annotations: Sequence[StringAnnotation]

@dataclass
-class SangerTraceData:
-    sequence: Sequence[str]
+class SangerTraceData(NamedString):
    seq_param_file_name: str
    analysis_proto_settings_name: str
    analysis_rpto_settings_ver: str