Added initialization steps for the submodule
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Jenkinsfile
vendored
4
Jenkinsfile
vendored
@ -11,6 +11,10 @@ pipeline {
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parallel {
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parallel {
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stage("recipes repo") {
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stage("recipes repo") {
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steps {
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steps {
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sh 'git config --global --add safe.directory /home/jenkins/agent/workspace/autoBIGS.engine-bioconda_main'
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sh 'git config --global --add safe.directory /home/jenkins/agent/workspace/autoBIGS.engine-bioconda_main/auto-updated-bioconda-recipes'
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sh 'git submodule init'
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sh 'git submodule update'
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dir('auto-updated-bioconda-recipes') {
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dir('auto-updated-bioconda-recipes') {
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sh 'git checkout update-autobigs-engine'
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sh 'git checkout update-autobigs-engine'
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}
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}
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