ydeng/autoBIGS.engine-bioconda
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Moved linting stage to bioconda specific publishing stages
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Harrison Deng 2025-02-20 17:59:02 +00:00
parent 077715509d
commit 2538cf2687
1 changed files with 15 additions and 15 deletions
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16
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@ -31,13 +31,6 @@ pipeline {
sh 'cp -r autobigs-engine/* auto-updated-bioconda-recipes/recipes/autobigs-engine/.' sh 'cp -r autobigs-engine/* auto-updated-bioconda-recipes/recipes/autobigs-engine/.'
} }
} }
stage("lint") {
steps {
dir('auto-updated-bioconda-recipes') {
sh 'bioconda-utils lint recipes/ --packages autobigs-engine'
}
}
}
stage("build") { stage("build") {
steps { steps {
dir('auto-updated-bioconda-recipes') { dir('auto-updated-bioconda-recipes') {
@ -52,7 +45,12 @@ pipeline {
archiveArtifacts artifacts: './conda-dist/**/*.conda', followSymlinks: false archiveArtifacts artifacts: './conda-dist/**/*.conda', followSymlinks: false
} }
} }
stage("commit") { stage("bioconda") {
stages {
stage('lint') {
sh 'bioconda-utils lint recipes/ --packages autobigs-engine'
}
stage('commit') {
environment { environment {
TOKEN = credentials('github.com') TOKEN = credentials('github.com')
} }
@ -63,6 +61,8 @@ pipeline {
} }
} }
} }
}
}
stage('git.reslate.systems') { stage('git.reslate.systems') {
environment { environment {
AUTH = credentials('git.reslate.systems') AUTH = credentials('git.reslate.systems')