Harrison Deng 18b003e0e2
All checks were successful
NSBDiagnosisToolkit/pipeline/head This commit looks good
No more error when output folder already exists
2025-01-03 22:49:00 +00:00

27 lines
906 B
JSON

{
// Use IntelliSense to learn about possible attributes.
// Hover to view descriptions of existing attributes.
// For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387
"version": "0.2.0",
"configurations": [
{
"name": "CLI ipdbmlst",
"type": "debugpy",
"request": "launch",
"program": "${workspaceFolder}/src/nsbdiagnosistoolkit/cli/root.py",
"console": "integratedTerminal",
"args": [
"-fa",
"${workspaceFolder}/tests/resources/tohama_I_bpertussis.fasta",
"-ipdbmlst",
"pubmlst_bordetella_seqdef",
"${workspaceFolder}/output"
],
"cwd": "${workspaceFolder}/src",
"env": {
"PYTHONPATH": "${workspaceFolder}/src"
}
}
]
}