Completed untested annotation function

2025-01-02 21:53:55 +00:00
parent aa2d494bee
commit 28733337d2
2 changed files with 13 additions and 5 deletions
--- a/tests/mlstmyfasta/engine/test_annotations.py
+++ b/tests/mlstmyfasta/engine/test_annotations.py
@@ -8,4 +8,5 @@ async def test_fetch_ncbi_genbank_with_id_works():

 async def test_annotate_from_genbank_results_in_annotations():
    sequence = SeqIO.read("tests/resources/tohama_I_bpertussis.fasta", "fasta").seq
-    assert (await annotate_from_genbank("CP011448.1", str(sequence))) is AnnotatedString
+    annotated_sequence = await annotate_from_genbank("CP011448.1", "bpertussis_tohamaI", str(sequence))
+    assert annotated_sequence is AnnotatedString