generated from ydeng/python-program
18 lines
1.4 KiB
Plaintext
18 lines
1.4 KiB
Plaintext
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##fileformat=VCFv4.1
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##fileDate=10122015_22h01m13s
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##source=SHAPEIT2.v837
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##log_file=shapeit_10122015_22h01m13s_3f764d75-2fbb-42df-ab75-8c2dfd5731ce.log
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##FORMAT=<ID=GT,Number=1,Type=String,Description="Phased Genotype">
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#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT Gambian Chinese French Brazilian Nigerian Pakistani English Colombian Indian Japanese
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1 846808 rs4475691 C T 100 . AC=1276;AN=5008;DP=20368 GT 1|1 0|0 0|0 ./. 0|0 0|0 0|0 0|0 ./. 0|0
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1 846854 rs111957712 G A 100 . AC=114;AN=5008;DP=20538 GT ./. 0|0 0|0 0|0 0|0 0|0 ./. ./. 0|0 0|0
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1 846864 rs950122 G C 100 . AC=1116;AN=5008;DP=20582 GT 1|1 0|0 0|0 0|0 0|0 0|0 0|0 0|0 ./. 0|0
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1 847228 rs3905286 C T 100 . AC=1215;AN=5008;DP=20731 GT 1|1 0|0 0|0 0|0 0|0 0|0 0|0 0|0 0|1 0|0
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1 847297 rs11507768 G A 100 . AC=359;AN=5008;DP=20809 GT 1|0 0|0 0|0 ./. 0|0 0|0 ./. 0|0 0|0 0|0
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1 847491 rs28407778 G A 100 . AC=1262;AN=5008;DP=16939 GT 1|1 0|0 0|0 0|0 0|0 ./. 0|0 0|0 0|1 0|0
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1 848023 rs144407116 C A 100 . AC=52;AN=5008;DP=22562 GT 0|1 0|0 0|0 0|0 0|0 0|0 0|0 0|0 0|0 0|0
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1 848090 rs4246505 G A 100 . AC=857;AN=5008;DP=19301 GT 0|0 0|0 0|0 0|0 0|0 0|0 ./. 0|0 ./. 0|0
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1 848445 rs4626817 G A 100 . AC=1255;AN=5008;DP=18444 GT 1|1 0|0 0|0 0|0 0|0 0|0 0|0 ./. ./. 0|0
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1 848456 rs11507767 A G 100 . AC=1266;AN=5008;DP=18137 GT 1|1 ./. 0|0 0|0 0|0 0|0 0|0 0|0 0|1 ./.
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1 848738 rs3829741 C T 100 . AC=855;AN=5008;DP=16663 GT 0|0 0|0 0|0 0|0 0|0 0|0 0|0 0|0 0|1 0|0
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