14 Commits

Author SHA1 Message Date
7bfe49445a Moved steps and removed 'clean' stage 2023-04-28 14:11:24 -05:00
f0da142377 Updated documentation publishing title and 'README.md' to link to CI 2023-04-28 14:10:15 -05:00
4383e36c1f Removed space in doc title 2023-04-28 14:01:10 -05:00
cbf32d253b Added docs cleaning step to pipeline 2023-04-28 13:56:10 -05:00
e942b65ebd Added '--force' to 'sphinx-apidoc' step 2023-04-28 13:42:38 -05:00
47cdd8bc28 Added basic automatic documentation generation 2023-04-28 13:28:12 -05:00
11d5590355 Added another post-installation test step 2023-04-28 11:32:17 -05:00
3c5e934c7c Updated 'Jenkinsfile' to fingerprint generated artifacts 2023-04-28 11:14:42 -05:00
2f86ec050f Pipeline now updates environment if possible, otherwise, re-creates it 2023-04-28 11:02:15 -05:00
51c2bd1f7b Conda environment creation now has '--force' for pipeline 2023-04-28 10:58:31 -05:00
ae3732eba2 Many changes, see details:
Now allow for changing whether alignment is local or global and various scoring parameters

Refactored directory structure

Removed redundant aligned dict pattern for simple iterable

Added unit tests
2023-04-28 10:49:07 -05:00
f1fe568818 Added testing of pip installation and archiving 2023-04-24 09:40:29 -05:00
1d0da9a675 CI no longer fails on unsuccessful package upload 2023-04-21 14:33:26 -05:00
6b3c9c312e Added 'Jenkinsfile' and 'environment.yml' 2023-04-21 11:44:01 -05:00