4d2c491733
Merge branch 'develop'
ydeng/bmlsa/pipeline/head This commit looks good
2023-05-03 08:21:42 -05:00
842458f20c
Updated 'Jenkinsfile' to no longer activate environment
ydeng/bmlsa/pipeline/head This commit looks good
2023-05-03 08:17:34 -05:00
40c8afe68c
Updated 'Jenkinsfile' to conform to new build container usage
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2023-05-03 08:13:18 -05:00
a5b7d2773e
Pipeline no longer fails build if testing step fails
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2023-04-28 21:47:18 +00:00
d6edc0e317
Changing documentation generation structure
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2023-04-28 15:47:27 -05:00
7bfe49445a
Moved steps and removed 'clean' stage
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2023-04-28 14:11:24 -05:00
f0da142377
Updated documentation publishing title and 'README.md' to link to CI
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2023-04-28 14:10:15 -05:00
4383e36c1f
Removed space in doc title
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2023-04-28 14:01:10 -05:00
cbf32d253b
Added docs cleaning step to pipeline
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2023-04-28 13:56:10 -05:00
e942b65ebd
Added '--force' to 'sphinx-apidoc' step
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2023-04-28 13:42:38 -05:00
47cdd8bc28
Added basic automatic documentation generation
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2023-04-28 13:28:12 -05:00
11d5590355
Added another post-installation test step
2023-04-28 11:32:17 -05:00
3c5e934c7c
Updated 'Jenkinsfile' to fingerprint generated artifacts
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2023-04-28 11:14:42 -05:00
2f86ec050f
Pipeline now updates environment if possible, otherwise, re-creates it
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2023-04-28 11:02:15 -05:00
51c2bd1f7b
Conda environment creation now has '--force' for pipeline
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2023-04-28 10:58:31 -05:00
ae3732eba2
Many changes, see details:
...
ydeng/bmlsa/pipeline/head There was a failure building this commit
Now allow for changing whether alignment is local or global and various scoring parameters
Refactored directory structure
Removed redundant aligned dict pattern for simple iterable
Added unit tests
2023-04-28 10:49:07 -05:00
f1fe568818
Added testing of pip installation and archiving
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2023-04-24 09:40:29 -05:00
1d0da9a675
CI no longer fails on unsuccessful package upload
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2023-04-21 14:33:26 -05:00
6b3c9c312e
Added 'Jenkinsfile' and 'environment.yml'
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2023-04-21 11:44:01 -05:00
