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 # BMLSA
 
-A Basic multi local sequence alignment tool using the Biopython implementation of the Smith-Waterman alignment algorithm
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+A Basic multi local sequence alignment tool using the Biopython implementation of the Smith-Waterman alignment algorithm.
+
+## Features
+
+ - Aligns a CSV of short sequences locally to a given reference sequence
+ - Outputs in a CSV with old and new positions
+ - Selectable parameters for alignment
+ - Compatible with broad-range of input CSV formats
+ - Automatically align with all sequences in reference FASTA
+ - All produced output is human readable!
+