diff --git a/Jenkinsfile b/Jenkinsfile index 6e18ecc..8e97804 100644 --- a/Jenkinsfile +++ b/Jenkinsfile @@ -27,6 +27,7 @@ pipeline { steps { sh "pip install dist/*.whl --force-reinstall" sh "bmlsa -h" + sh "bmlsa -I id -S sequence -B BLASTp tests/resources/SARS_CoV-2_genes.csv tests/resources/NC_045512_coding.fasta /output/" } } stage("archive") {