# addSACCE_APSESproteins.R # Adds the Saccharomyces cerevisiae APSES proteins to myDB # myDB$protein <- rbind(myDB$protein, data.frame( ID = dbAutoincrement(myDB$protein$ID, ns = "ref"), name = "SWI4_SACCE", RefSeqID = "NP_011036", UniProtID = "P25302", taxonomy.ID = as.integer(4932), sequence = dbSanitizeSequence(" 1 mpfdvlisnq kdntnhqnit pisksvllap hsnhpvieia tysetdvyec yirgfetkiv 61 mrrtkddwin itqvfkiaqf sktkrtkile kesndmqhek vqggygrfqg twipldsakf 121 lvnkyeiidp vvnsiltfqf dpnnpppkrs knsilrktsp gtkitspssy nktprkknss 181 sstsatttaa nkkgkknasi nqpnpsplqn lvfqtpqqfq vnssmnimnn ndnhttmnfn 241 ndtrhnlinn isnnsnqsti iqqqksihen sfnnnysatq kplqffpipt nlqnknvaln 301 npnnndsnsy shnidnvins snnnnngnnn nliivpdgpm qsqqqqqhhh eyltnnfnhs 361 mmdsitngns kkrrkklnqs neqqfynqqe kiqrhfklmk qpllwqsfqn pndhhneycd 421 sngsnnnnnt vasngssiev fssnendnsm nmssrsmtpf sagntssqnk lenkmtdqey 481 kqtiltilss erssdvdqal latlypapkn fninfeiddq ghtplhwata maniplikml 541 itlnanalqc nklgfncitk sifynncyke nafdeiisil kiclitpdvn grlpfhylie 601 lsvnksknpm iiksymdsii lslgqqdynl lkiclnyqdn igntplhlsa lnlnfevynr 661 lvylgastdi lnldnespas imnkfntpag gsnsrnnntk adrklarnlp qknyyqqqqq 721 qqqpqnnvki pkiiktqhpd kedstadvni aktdsevnes qylhsnqpns tnmntimedl 781 sninsfvtss vikdikstps kilenspily rrrsqsisde kekakdnenq vekkkdplns 841 vktampsles pssllpiqms plgkyskpls qqinklntkv sslqrimgee iknldnevve 901 tessisnnkk rlitiahqie dafdsvsnkt pinsisdlqs riketsskln sekqnfiqsl 961 eksqalklat ivqdeeskvd mntnssshpe kqedeepipk stsetsspkn tkadakfsnt 1021 vqesydvnet lrlateltil qfkrrmttlk iseakskins svkldkyrnl igitienids 1081 klddiekdlr ana"), stringsAsFactors = FALSE)) myDB$protein <- rbind(myDB$protein, data.frame( ID = dbAutoincrement(myDB$protein$ID, ns = "ref"), name = "PHD1_SACCE", RefSeqID = "NP_012881", UniProtID = "P36093", taxonomy.ID = as.integer(4932), sequence = dbSanitizeSequence(" 1 myhvpemrlh yplvntqsna aitptrsydn tlpsfnelsh qstinlpfvq retpnayanv 61 aqlatsptqa ksgyycryya vpfptypqqp qspyqqavlp yatipnsnfq pssfpvmavm 121 ppevqfdgsf lntlhphtel ppiiqntndt svarpnnlks iaaasptvta ttrtpgvsst 181 svlkprvitt mwedenticy qveangisvv rradnnming tkllnvtkmt rgrrdgilrs 241 ekvrevvkig smhlkgvwip ferayilaqr eqildhlypl fvkdiesivd arkpsnkasl 301 tpksspapik qepsdnkhei ateikpksid alsngastqg agelphlkin hidteaqtsr 361 aknels"), stringsAsFactors = FALSE)) myDB$protein <- rbind(myDB$protein, data.frame( ID = dbAutoincrement(myDB$protein$ID, ns = "ref"), name = "SOK2_SACCE", RefSeqID = "NP_013729", UniProtID = "P53438", taxonomy.ID = as.integer(4932), sequence = dbSanitizeSequence(" 1 mpignpintn diksnrmrqe snmsavsnse stigqstqqq qqqqqylgqs vqplmpvsyq 61 yvvpeqwpyp qyyqqpqsqs qqqlqsqpqm yqvqesfqss gsdsnasnpp stsvgvpsna 121 tatalpngsa ittkksnnst nisnnvpyyy yfpqmqaqqs maysypqayy yypangdgtt 181 ngatpsvtsn qvqnpnlekt ystfeqqqqh qqqqqlqaqt ypaqppkign afskfsksgp 241 psdsssgsms pnsnrtsrns nsisslaqqp pmsnypqpst yqypgfhkts sipnshspip 301 prslttptqg ptsqngplsy nlpqvgllpp qqqqqvsply dgnsitppvk pstdqetylt 361 anrhgvsdqq ydsmaktmns fqtttirhpm pliattnatg sntsgtsasi irprvtttmw 421 edektlcyqv eangisvvrr adndmvngtk llnvtkmtrg rrdgilkaek irhvvkigsm 481 hlkgvwipfe ralaiaqrek iadylyplfi rdiqsvlkqn npsndsssss sstgiksisp 541 rtyyqpinny qnpngpsnis aaqltyssmn lnnkiipnns ipavstiaag ekplkkctmp 601 nsnqleghti tnlqtlsatm pmkqqlmgni asplsyprna tmnsastlgi tpadskpltp 661 sptttntnqs sesnvgsiht gitlprvese sashskwske adsgntvpdn qtlkeprssq 721 lpisaltstd tdkiktstsd eatqpnepse aepvkesess ksqvdgagdv sneeiaaddt 781 kkqek"), stringsAsFactors = FALSE)) myDB$protein <- rbind(myDB$protein, data.frame( ID = dbAutoincrement(myDB$protein$ID, ns = "ref"), name = "XBP1_SACCE", RefSeqID = "NP_012165", UniProtID = "P40489", taxonomy.ID = as.integer(4932), sequence = dbSanitizeSequence(" 1 mkypafsins dtvhltdnpl ddyqrlylvs vldrdsppas fsaglnirkv nykssiaaqf 61 thpnfiisar dagngeeaaa qnvlncfeyq fpnlqtiqsl vheqtllsql assatphsal 121 hlhdknilmg kiilpsrsnk tpvsasptkq ekkalstasr enatssltkn qqfkltkmdh 181 nlindklinp nncviwshds gyvfmtgiwr lyqdvmkgli nlprgdsvst sqqqffckae 241 fekilsfcfy nhssftsees ssvllsssts sppkrrtstg stfldanass sstsstqann 301 yidfhwnnik pelrdlicqs ykdflinelg pdqidlpnln panftkrirg gyikiqgtwl 361 pmeisrllcl rfcfpiryfl vpifgpdfpk dceswylahq nvtfassttg agaataataa 421 antstnftst avarprqkpr prprqrstsm shskaqklvi edalpsfdsf venlglssnd 481 knfikknskr qksstytsqt sspigprdpt vqilsnlasf ynthghrysy pgniyipqqr 541 yslpppnqls spqrqlnyty dhihpvpsqy qsprhynvps spiapapptf pqpygddhyh 601 flkyasevyk qqnqrpahnt ntnmdtsfsp rannslnnfk fktnskq"), stringsAsFactors = FALSE)) # [END]