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affe00f6fb
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Line termination change and old code.
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2021-11-16 00:31:48 -05:00 |
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hyginn
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86d619ad51
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rewrite getMYSPE()
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2021-09-18 12:00:51 -04:00 |
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hyginn
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052e148999
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Removed lock-out message
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2020-10-14 06:18:07 +10:00 |
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hyginn
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c064b34000
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add sealKey()
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2020-10-12 09:16:52 +10:00 |
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hyginn
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8a5c5b3961
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return taxID as name of return value
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2020-10-01 11:18:08 +10:00 |
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hyginn
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9e77d948e9
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return ChimeraX response invisibly and provide example of using the data for a plot
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2020-09-29 14:12:11 +10:00 |
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hyginn
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df3dbb0fb6
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add CX() command for ChimeraX rempote control from R-scripts.
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2020-09-27 23:40:01 +10:00 |
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hyginn
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092494d9de
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update validateFASTA() logic to accommodate blanks in spacers
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2020-09-26 00:43:10 +10:00 |
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hyginn
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126f956ea7
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update TOC
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2020-09-25 21:07:25 +10:00 |
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hyginn
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85d53ae2ee
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New AA colouring scheme - with better separation and transparent colours for overlapping plots. prcomp() analysis of amino acid similarity.
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2020-09-25 21:06:24 +10:00 |
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hyginn
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f48b6bf3b7
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add constants AAVALID; NUCVALID, NUCAMBIG. add AACOLS; add validateFA(); readFASTA; writeFASTA.
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2020-09-24 18:43:44 +10:00 |
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hyginn
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76b18a8a35
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Update PPI-Analysis assets and code
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2020-09-23 20:47:26 +10:00 |
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hyginn
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42ad74b2f2
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Changed 1 to 3
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2020-09-23 14:13:52 +10:00 |
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hyginn
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67c92a49d9
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change validation logic in selectPDBrep() and add seal()
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2020-09-22 13:02:10 +10:00 |
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hyginn
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cfbfee9dba
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add digest:: and jsonlite::, and sameSpecies(),
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2020-09-21 21:34:45 +10:00 |
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hyginn
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7536473c5d
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Updated MYSPE data and entire workflow. Changed all .RData to .rds
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2020-09-21 14:28:24 +10:00 |
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hyginn
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37ef655d47
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2020 updates - deactivate for maintenance
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2020-09-18 21:56:30 +10:00 |
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hyginn
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bae2d33f14
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Prefix Biostrings:: to subseq()
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2019-11-14 22:38:53 -05:00 |
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hyginn
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1dd87e7473
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Maintainance fixes and UniProt API change bugfix
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2018-10-30 21:27:42 -04:00 |
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hyginn
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7cc2853d00
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add fetchMSAmotif() function
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2017-11-01 09:43:48 -04:00 |
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hyginn
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553b042f20
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MSA unit, and supporting files
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2017-10-28 23:09:21 -04:00 |
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hyginn
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b748c1264c
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Add selectPDBrep() function to select random, representative PDB IDs
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2017-10-21 21:00:18 -04:00 |
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hyginn
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c148d95071
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updates to biCode() function - handle NA and short input
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2017-10-15 18:44:06 -04:00 |
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hyginn
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4fb2506e58
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refactor biCode to bring it in line with current coding standards
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2017-10-06 08:49:10 -04:00 |
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hyginn
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e1679d8d07
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Update for dbUtilities
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2017-09-25 01:29:43 -04:00 |
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hyginn
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ad783c1254
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Added BLAST wait-timer
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2017-09-21 17:49:15 -04:00 |
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hyginn
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1bb04b8bec
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Added and updated learning units
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2017-09-12 16:09:20 -04:00 |
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hyginn
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7c47af1b3d
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Install files and folders
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2017-08-18 22:04:01 +02:00 |
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