First minor updates 2021
This commit is contained in:
hyginn
parent
44209e6495
commit
678b70ed68
@ -3,18 +3,19 @@
|
|||||||
# Purpose: Reference to graphical output in R.
|
# Purpose: Reference to graphical output in R.
|
||||||
#
|
#
|
||||||
#
|
#
|
||||||
# Version: 2.0
|
# Version: 2.1
|
||||||
#
|
#
|
||||||
# Date: 2017 09 - 2020 10
|
# Date: 2017 09 - 2021 09
|
||||||
# Author: Boris Steipe (boris.steipe@utoronto.ca)
|
# Author: Boris Steipe (boris.steipe@utoronto.ca)
|
||||||
#
|
#
|
||||||
|
# V 2.1 First minor updates 2021
|
||||||
# V 2.0 Comprehensive reference with basic and advanced options based on
|
# V 2.0 Comprehensive reference with basic and advanced options based on
|
||||||
# an integrated yeast gene expression dataset. Full rewrite of most
|
# an integrated yeast gene expression dataset. Full rewrite of most
|
||||||
# sections.
|
# sections.
|
||||||
# V 1.1 Stylistic improvements, code polish, and additional examples
|
# V 1.1 Stylistic improvements, code polish, and additional examples
|
||||||
# V 1.0 Digest from "plotting reference" files
|
# V 1.0 Digest from "plotting reference" files
|
||||||
#
|
#
|
||||||
# ToDo:
|
# ToDo: Demo 6.3.2 in parallel plots
|
||||||
#
|
#
|
||||||
#
|
#
|
||||||
|
|
||||||
@ -22,44 +23,45 @@
|
|||||||
#TOC> ==========================================================================
|
#TOC> ==========================================================================
|
||||||
#TOC>
|
#TOC>
|
||||||
#TOC> Section Title Line
|
#TOC> Section Title Line
|
||||||
#TOC> ------------------------------------------------------------------
|
#TOC> -------------------------------------------------------------------
|
||||||
#TOC> 01 INITIALIZE 67
|
#TOC> 01 INITIALIZE 69
|
||||||
#TOC> 02 THIS REFERENCE ... 72
|
#TOC> 02 THIS REFERENCE ... 74
|
||||||
#TOC> 02.1 Dataset Documentation 79
|
#TOC> 02.1 Dataset Documentation 81
|
||||||
#TOC> 03 PROPORTIONS AND DISTRIBUTIONS 191
|
#TOC> 03 PROPORTIONS AND DISTRIBUTIONS 193
|
||||||
#TOC> 03.1 barplot() 196
|
#TOC> 03.1 barplot() 198
|
||||||
#TOC> 03.2 pie() 220
|
#TOC> 03.2 pie() 222
|
||||||
#TOC> 03.3 boxplot() 252
|
#TOC> 03.3 boxplot() 254
|
||||||
#TOC> 03.4 hist() 310
|
#TOC> 03.4 hist() 312
|
||||||
#TOC> 03.4.1 overlaying histograms 355
|
#TOC> 03.4.1 overlaying histograms 357
|
||||||
#TOC> 04 THE plot() FUNCTION 398
|
#TOC> 04 THE plot() FUNCTION 400
|
||||||
#TOC> 04.1 line plots 402
|
#TOC> 04.1 line plots 404
|
||||||
#TOC> 05 ENCODING INFORMATION: SYMBOL, SIZE, COLOR 501
|
#TOC> 05 ENCODING INFORMATION: SYMBOL, SIZE, COLOuR 503
|
||||||
#TOC> 05.1 pch ("plotting character" symbols) 507
|
#TOC> 05.1 pch ("plotting character" symbols) 509
|
||||||
#TOC> 05.1.1 Line types 682
|
#TOC> 05.1.1 Line types 684
|
||||||
#TOC> 06 COLOUR 704
|
#TOC> 05.2 cex ("character expansion" size) 708
|
||||||
#TOC> 06.1 Colours by number 712
|
#TOC> 06 COLOUR 768
|
||||||
#TOC> 06.2 Colours by name 730
|
#TOC> 06.1 Colours by number 776
|
||||||
#TOC> 06.3 Colours as hex-triplets 756
|
#TOC> 06.2 Colours by name 794
|
||||||
#TOC> 06.3.1 Inbuilt palettes 811
|
#TOC> 06.3 Colours as hex-triplets 820
|
||||||
#TOC> 06.3.2 Custom palettes 887
|
#TOC> 06.3.1 Inbuilt palettes 875
|
||||||
#TOC> 06.3.3 Transparency: The Alpha Channel 937
|
#TOC> 06.3.2 Custom palettes 952
|
||||||
#TOC> 06.4 abline(), lines() and segments() 983
|
#TOC> 06.3.3 Transparency: The Alpha Channel 1002
|
||||||
#TOC> 07 AXES 1017
|
#TOC> 06.4 abline(), lines() and segments() 1047
|
||||||
#TOC> 08 LEGENDS 1054
|
#TOC> 07 AXES 1081
|
||||||
#TOC> 08.1 basic legends 1057
|
#TOC> 08 LEGENDS 1118
|
||||||
#TOC> 08.2 Color bars 1061
|
#TOC> 08.1 basic legends 1121
|
||||||
#TOC> 09 LAYOUT 1180
|
#TOC> 08.2 Color bars 1125
|
||||||
#TOC> 10 TEXT 1215
|
#TOC> 09 LAYOUT 1246
|
||||||
#TOC> 11 DRAWING ON PLOTS 1243
|
#TOC> 10 TEXT 1281
|
||||||
#TOC> 12 IMAGES 1310
|
#TOC> 11 DRAWING ON PLOTS 1309
|
||||||
#TOC> 13 CONTOUR LINES 1315
|
#TOC> 12 IMAGES 1376
|
||||||
#TOC> 14 3D PLOTS 1320
|
#TOC> 13 CONTOUR LINES 1381
|
||||||
#TOC> 15 GRAPHS AND NETWORKS 1325
|
#TOC> 14 3D PLOTS 1386
|
||||||
#TOC> 16 OTHER GRPAHICS PACKAGES 1330
|
#TOC> 15 GRAPHS AND NETWORKS 1391
|
||||||
#TOC> 17 INTERACTIVE PLOTS 1354
|
#TOC> 16 OTHER GRPAHICS PACKAGES 1396
|
||||||
#TOC> 17.1 locator() 1358
|
#TOC> 17 INTERACTIVE PLOTS 1420
|
||||||
#TOC> 17.2 plotly:: 1361
|
#TOC> 17.1 locator() 1424
|
||||||
|
#TOC> 17.2 plotly:: 1427
|
||||||
#TOC>
|
#TOC>
|
||||||
#TOC> ==========================================================================
|
#TOC> ==========================================================================
|
||||||
|
|
||||||
@ -703,7 +705,7 @@ for (i in 1:10) {
|
|||||||
|
|
||||||
|
|
||||||
|
|
||||||
# == 05.1 cex ("character expansion" size) =============================
|
# == 05.2 cex ("character expansion" size) =================================
|
||||||
|
|
||||||
# The size of characters can be controlled with the cex parameter. cex takes a
|
# The size of characters can be controlled with the cex parameter. cex takes a
|
||||||
# vector of numbers, mapped to the vecors of plotted elements. The usual R
|
# vector of numbers, mapped to the vecors of plotted elements. The usual R
|
||||||
|
|||||||
Loading…
Reference in New Issue
Block a user