2021-11-16 05:31:48 +00:00
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# addSACCE_APSESproteins.R
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# Adds the Saccharomyces cerevisiae APSES proteins to myDB
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#
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myDB$protein <-
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rbind(myDB$protein,
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data.frame(
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ID = dbAutoincrement(myDB$protein$ID, ns = "ref"),
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name = "SWI4_SACCE",
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RefSeqID = "NP_011036",
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UniProtID = "P25302",
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taxonomy.ID = as.integer(4932),
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sequence = dbSanitizeSequence("
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1 mpfdvlisnq kdntnhqnit pisksvllap hsnhpvieia tysetdvyec yirgfetkiv
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61 mrrtkddwin itqvfkiaqf sktkrtkile kesndmqhek vqggygrfqg twipldsakf
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121 lvnkyeiidp vvnsiltfqf dpnnpppkrs knsilrktsp gtkitspssy nktprkknss
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181 sstsatttaa nkkgkknasi nqpnpsplqn lvfqtpqqfq vnssmnimnn ndnhttmnfn
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241 ndtrhnlinn isnnsnqsti iqqqksihen sfnnnysatq kplqffpipt nlqnknvaln
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301 npnnndsnsy shnidnvins snnnnngnnn nliivpdgpm qsqqqqqhhh eyltnnfnhs
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361 mmdsitngns kkrrkklnqs neqqfynqqe kiqrhfklmk qpllwqsfqn pndhhneycd
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421 sngsnnnnnt vasngssiev fssnendnsm nmssrsmtpf sagntssqnk lenkmtdqey
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481 kqtiltilss erssdvdqal latlypapkn fninfeiddq ghtplhwata maniplikml
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541 itlnanalqc nklgfncitk sifynncyke nafdeiisil kiclitpdvn grlpfhylie
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601 lsvnksknpm iiksymdsii lslgqqdynl lkiclnyqdn igntplhlsa lnlnfevynr
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661 lvylgastdi lnldnespas imnkfntpag gsnsrnnntk adrklarnlp qknyyqqqqq
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721 qqqpqnnvki pkiiktqhpd kedstadvni aktdsevnes qylhsnqpns tnmntimedl
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781 sninsfvtss vikdikstps kilenspily rrrsqsisde kekakdnenq vekkkdplns
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841 vktampsles pssllpiqms plgkyskpls qqinklntkv sslqrimgee iknldnevve
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901 tessisnnkk rlitiahqie dafdsvsnkt pinsisdlqs riketsskln sekqnfiqsl
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961 eksqalklat ivqdeeskvd mntnssshpe kqedeepipk stsetsspkn tkadakfsnt
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1021 vqesydvnet lrlateltil qfkrrmttlk iseakskins svkldkyrnl igitienids
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1081 klddiekdlr ana"),
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stringsAsFactors = FALSE))
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myDB$protein <-
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rbind(myDB$protein,
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data.frame(
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ID = dbAutoincrement(myDB$protein$ID, ns = "ref"),
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name = "PHD1_SACCE",
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RefSeqID = "NP_012881",
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UniProtID = "P36093",
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taxonomy.ID = as.integer(4932),
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sequence = dbSanitizeSequence("
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1 myhvpemrlh yplvntqsna aitptrsydn tlpsfnelsh qstinlpfvq retpnayanv
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61 aqlatsptqa ksgyycryya vpfptypqqp qspyqqavlp yatipnsnfq pssfpvmavm
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121 ppevqfdgsf lntlhphtel ppiiqntndt svarpnnlks iaaasptvta ttrtpgvsst
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181 svlkprvitt mwedenticy qveangisvv rradnnming tkllnvtkmt rgrrdgilrs
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241 ekvrevvkig smhlkgvwip ferayilaqr eqildhlypl fvkdiesivd arkpsnkasl
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301 tpksspapik qepsdnkhei ateikpksid alsngastqg agelphlkin hidteaqtsr
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361 aknels"),
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stringsAsFactors = FALSE))
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myDB$protein <-
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rbind(myDB$protein,
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data.frame(
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ID = dbAutoincrement(myDB$protein$ID, ns = "ref"),
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name = "SOK2_SACCE",
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RefSeqID = "NP_013729",
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UniProtID = "P53438",
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taxonomy.ID = as.integer(4932),
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sequence = dbSanitizeSequence("
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1 mpignpintn diksnrmrqe snmsavsnse stigqstqqq qqqqqylgqs vqplmpvsyq
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61 yvvpeqwpyp qyyqqpqsqs qqqlqsqpqm yqvqesfqss gsdsnasnpp stsvgvpsna
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121 tatalpngsa ittkksnnst nisnnvpyyy yfpqmqaqqs maysypqayy yypangdgtt
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181 ngatpsvtsn qvqnpnlekt ystfeqqqqh qqqqqlqaqt ypaqppkign afskfsksgp
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241 psdsssgsms pnsnrtsrns nsisslaqqp pmsnypqpst yqypgfhkts sipnshspip
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301 prslttptqg ptsqngplsy nlpqvgllpp qqqqqvsply dgnsitppvk pstdqetylt
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361 anrhgvsdqq ydsmaktmns fqtttirhpm pliattnatg sntsgtsasi irprvtttmw
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421 edektlcyqv eangisvvrr adndmvngtk llnvtkmtrg rrdgilkaek irhvvkigsm
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481 hlkgvwipfe ralaiaqrek iadylyplfi rdiqsvlkqn npsndsssss sstgiksisp
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541 rtyyqpinny qnpngpsnis aaqltyssmn lnnkiipnns ipavstiaag ekplkkctmp
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601 nsnqleghti tnlqtlsatm pmkqqlmgni asplsyprna tmnsastlgi tpadskpltp
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661 sptttntnqs sesnvgsiht gitlprvese sashskwske adsgntvpdn qtlkeprssq
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721 lpisaltstd tdkiktstsd eatqpnepse aepvkesess ksqvdgagdv sneeiaaddt
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781 kkqek"),
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stringsAsFactors = FALSE))
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myDB$protein <-
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rbind(myDB$protein,
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data.frame(
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ID = dbAutoincrement(myDB$protein$ID, ns = "ref"),
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name = "XBP1_SACCE",
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RefSeqID = "NP_012165",
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UniProtID = "P40489",
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taxonomy.ID = as.integer(4932),
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sequence = dbSanitizeSequence("
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1 mkypafsins dtvhltdnpl ddyqrlylvs vldrdsppas fsaglnirkv nykssiaaqf
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61 thpnfiisar dagngeeaaa qnvlncfeyq fpnlqtiqsl vheqtllsql assatphsal
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121 hlhdknilmg kiilpsrsnk tpvsasptkq ekkalstasr enatssltkn qqfkltkmdh
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181 nlindklinp nncviwshds gyvfmtgiwr lyqdvmkgli nlprgdsvst sqqqffckae
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241 fekilsfcfy nhssftsees ssvllsssts sppkrrtstg stfldanass sstsstqann
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301 yidfhwnnik pelrdlicqs ykdflinelg pdqidlpnln panftkrirg gyikiqgtwl
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361 pmeisrllcl rfcfpiryfl vpifgpdfpk dceswylahq nvtfassttg agaataataa
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421 antstnftst avarprqkpr prprqrstsm shskaqklvi edalpsfdsf venlglssnd
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481 knfikknskr qksstytsqt sspigprdpt vqilsnlasf ynthghrysy pgniyipqqr
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541 yslpppnqls spqrqlnyty dhihpvpsqy qsprhynvps spiapapptf pqpygddhyh
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601 flkyasevyk qqnqrpahnt ntnmdtsfsp rannslnnfk fktnskq"),
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stringsAsFactors = FALSE))
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# [END]
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