Harrison Deng
d2dfbb9464
Some checks reported errors
autoBIGS.galaxy/pipeline/head Something is wrong with the build of this commit
33 lines
1.0 KiB
Groovy
33 lines
1.0 KiB
Groovy
pipeline {
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agent {
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kubernetes {
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cloud 'rsys-devel'
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defaultContainer 'pip'
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inheritFrom 'pip'
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}
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}
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stages {
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stage ("install") {
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steps {
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sh 'useradd galaxy -m'
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sh 'apt update'
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sh 'apt install sudo -y'
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sh 'pip install -r requirements.txt'
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sh 'pip install standard-imghdr'
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}
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}
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stage ("lint") {
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steps {
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sh "planemo lint autobigs-cli.xml"
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}
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}
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stage ("test") {
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steps {
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sh 'mkdir test_results'
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sh "sudo -u galaxy planemo test autobigs-cli.xml --test_output_junit test_results/junit_results.xml --test_output_json test_results/results.json --test_output test_results/human.html"
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xunit checksName: '', tools: [JUnit(excludesPattern: '', pattern: 'test_results/junit_report.xml', stopProcessingIfError: true)]
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}
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}
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}
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} |