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cac100d0ac
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fe43e93576 |
2
.gitignore
vendored
2
.gitignore
vendored
@ -1,2 +1,2 @@
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autobigs-cli_test_report.html
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galaxy-server/*
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galaxy-server/**
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<tool id="autobigs-cli" name="AutoBIGS.CLI" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.05">
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<description>Automated MLST typing from PubMLST and InstitutPasteur.</description>
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<macros>
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<token name="@TOOL_VERSION@">0.4.2</token>
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<token name="@TOOL_VERSION@">0.4.3</token>
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<token name="@VERSION_SUFFIX@">0</token>
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<import>autobigs-cli_macros.xml</import>
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<expand macro="bio_tools"/>
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@ -35,7 +35,9 @@
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<option value="databases"/>
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</param>
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<when value="schema">
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<param name="selected_schema" argument="--retrieve-bigsdb-schemas" label="Retrieve schemas for" type="integer" min="0"/>
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<repeat name="schemas" title="Schemas">
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<param name="selected_schema" argument="--retrieve-bigsdb-schemas" label="Retrieve schemas for" type="integer" min="0"/>
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</repeat>
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</when>
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<when value="databases">
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<!-- No need to do anything -->
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</conditional>
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</inputs>
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<outputs>
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<data name="mlst_profiles_output" label="${tool.name} on ${on_string}" format="csv" />
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<data name="mlst_profiles_output" label="${tool.name} on ${on_string}" format="csv">
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<filter>mode == "st"</filter>
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</data>
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</outputs>
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<tests>
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<test>
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