Pipeline will now only publish to git.reslate.systems on main branch

Alleles IDs obtained from one sequence is named the ID of that sequence
Instead of generating a tuple comprised of the one sequence ID repeated
2025-02-26 06:31:53 +00:00 · 2025-02-26 06:15:56 +00:00
2 changed files with 5 additions and 1 deletions
--- a/4
+++ b/4
@@ -35,6 +35,10 @@ pipeline {
        stage("publish") {
            parallel {
                stage ("git.reslate.systems") {
+                    when {
+                        branch '**/main'
+                    }
+
                    environment {
                        CREDS = credentials('username-password-rs-git')
                    }
--- a/src/autobigs/engine/analysis/bigsdb.py
+++ b/src/autobigs/engine/analysis/bigsdb.py
@@ -127,7 +127,7 @@ class RemoteBIGSdbMLSTProfiler(BIGSdbMLSTProfiler):
                raise ValueError("Passed in no alleles.")
            result_mlst_profile = MLSTProfile(allele_set, scheme_fields_returned["ST"], scheme_fields_returned["clonal_complex"])
            if len(names_list) > 0:
-                result_mlst_profile = NamedMLSTProfile(str(tuple(names_list)), result_mlst_profile)
+                result_mlst_profile = NamedMLSTProfile(str(tuple(names_list)) if len(set(names_list)) > 1 else names_list[0], result_mlst_profile)
            return result_mlst_profile

    async def profile_string(self, query_sequence_strings: Iterable[Union[NamedString, str]]) -> Union[NamedMLSTProfile, MLSTProfile]:
Author	SHA1	Message	Date
Harrison Deng	2ea2f63f29	Pipeline will now only publish to git.reslate.systems on main branch All checks were successful autoBIGS.engine/pipeline/tag This commit looks good Details autoBIGS.engine/pipeline/head This commit looks good Details	2025-02-26 06:31:53 +00:00
Harrison Deng	17932ecd71	Alleles IDs obtained from one sequence is named the ID of that sequence Some checks failed autoBIGS.engine/pipeline/head There was a failure building this commit Details Instead of generating a tuple comprised of the one sequence ID repeated	2025-02-26 06:15:56 +00:00