Refactoring project name to autoBIGSst.engine

tests/autobigsst/engine/data/local/test_csv.py

@@ -1,5 +1,5 @@
-from automlst.engine.data.local.csv import dict_loci_alleles_variants_from_loci
-from automlst.engine.data.structures.mlst import Allele
+from autobigsst.engine.data.local.csv import dict_loci_alleles_variants_from_loci
+from autobigsst.engine.data.structures.mlst import Allele
 
 
 def test_dict_loci_alleles_variants_from_loci_single_loci_not_list():

tests/autobigsst/engine/data/local/test_fasta.py

@@ -1,4 +1,4 @@
-from automlst.engine.data.local.fasta import read_fasta
+from autobigsst.engine.data.local.fasta import read_fasta
 
 
 async def test_fasta_reader_not_none():

tests/autobigsst/engine/data/remote/databases/test_bigsdb.py

@@ -3,10 +3,10 @@ import re
 from typing import Collection, Sequence, Union
 from Bio import SeqIO
 import pytest
-from automlst.engine.data.structures.genomics import NamedString
-from automlst.engine.data.structures.mlst import Allele, MLSTProfile
-from automlst.engine.exceptions.database import NoBIGSdbExactMatchesException, NoBIGSdbMatchesException
-from automlst.engine.data.remote.databases.bigsdb import BIGSdbIndex, BIGSdbMLSTProfiler
+from autobigsst.engine.data.structures.genomics import NamedString
+from autobigsst.engine.data.structures.mlst import Allele, MLSTProfile
+from autobigsst.engine.exceptions.database import NoBIGSdbExactMatchesException, NoBIGSdbMatchesException
+from autobigsst.engine.data.remote.databases.bigsdb import BIGSdbIndex, BIGSdbMLSTProfiler
 
 def gene_scrambler(gene: str, mutation_site_count: Union[int, float], alphabet: Sequence[str] = ["A", "T", "C", "G"]):
     rand = random.Random(gene)