ydeng/autoBIGS.engine
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

Updated tests to reflect new fasta read naming
All checks were successful
autoBIGS.engine/pipeline/head This commit looks good
Details

Browse Source
This commit is contained in:
Harrison Deng 2025-03-13 14:25:44 +00:00
parent 62fdada9c1
commit 481870db97
1 changed files with 6 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

7
tests/autobigs/engine/test_reading.py
View File

@ -4,4 +4,9 @@ from autobigs.engine.reading import read_fasta
async def test_fasta_reader_not_none():
named_strings = await read_fasta("tests/resources/tohama_I_bpertussis.fasta")
for named_string in named_strings:
assert named_string.name == "BX470248.1"
assert named_string.name is not None
async def test_fasta_reader_name_contains_file_and_id():
named_strings = await read_fasta("tests/resources/tohama_I_bpertussis.fasta")
for named_string in named_strings:
assert named_string.name == "tohama_I_bpertussis.fasta:BX470248.1"