Renamed tests subdirectory to mirror source

This commit is contained in:
2025-01-09 15:00:46 +00:00
parent 59cb5230e8
commit 2c412c5526
5 changed files with 2 additions and 1 deletions

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import os
from automlst.engine.local.abif import read_abif, reference_consensus_assembly
async def test_load_sanger_sequence_has_data():
assert os.path.exists("tests/resources/1I1_F_P1815443_047.ab1")
result_data = await read_abif("tests/resources/1I1_F_P1815443_047.ab1")
assert result_data is not None
async def test_consensus_assembly_with_ncbi():
consensus = reference_consensus_assembly("ON685494.1", [await read_abif("tests/resources/1I1_F_P1815443_047.ab1"), await read_abif("tests/resources/1I1_R_P1815443_094.ab1")])
# TODO complete implementing this

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from automlst.engine.local.fasta import read_fasta
async def test_fasta_reader_not_none():
named_strings = read_fasta("tests/resources/tohama_I_bpertussis.fasta")
async for named_string in named_strings:
assert named_string.name == "BX470248.1"