Updated naming (again).
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@@ -1,5 +1,5 @@
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from autobigsst.engine.data.local.csv import dict_loci_alleles_variants_from_loci
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from autobigsst.engine.data.structures.mlst import Allele
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from autobigs.engine.data.local.csv import dict_loci_alleles_variants_from_loci
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from autobigs.engine.data.structures.mlst import Allele
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def test_dict_loci_alleles_variants_from_loci_single_loci_not_list():
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@@ -1,4 +1,4 @@
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from autobigsst.engine.data.local.fasta import read_fasta
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from autobigs.engine.data.local.fasta import read_fasta
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async def test_fasta_reader_not_none():
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@@ -3,10 +3,10 @@ import re
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from typing import Collection, Sequence, Union
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from Bio import SeqIO
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import pytest
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from autobigsst.engine.data.structures.genomics import NamedString
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from autobigsst.engine.data.structures.mlst import Allele, MLSTProfile
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from autobigsst.engine.exceptions.database import NoBIGSdbExactMatchesException, NoBIGSdbMatchesException
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from autobigsst.engine.data.remote.databases.bigsdb import BIGSdbIndex, BIGSdbMLSTProfiler
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from autobigs.engine.data.structures.genomics import NamedString
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from autobigs.engine.data.structures.mlst import Allele, MLSTProfile
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from autobigs.engine.exceptions.database import NoBIGSdbExactMatchesException, NoBIGSdbMatchesException
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from autobigs.engine.data.remote.databases.bigsdb import BIGSdbIndex, BIGSdbMLSTProfiler
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def gene_scrambler(gene: str, mutation_site_count: Union[int, float], alphabet: Sequence[str] = ["A", "T", "C", "G"]):
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rand = random.Random(gene)
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