Copied over most code from another of my projects

This commit is contained in:
2025-01-08 15:14:06 +00:00
commit 02985d5e37
32 changed files with 59455 additions and 0 deletions

27
.vscode/launch.json vendored Normal file
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{
// Use IntelliSense to learn about possible attributes.
// Hover to view descriptions of existing attributes.
// For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387
"version": "0.2.0",
"configurations": [
{
"name": "CLI ipdbmlst",
"type": "debugpy",
"request": "launch",
"program": "${workspaceFolder}/src/automlst/cli/root.py",
"console": "integratedTerminal",
"args": [
"-fa",
"${workspaceFolder}/tests/resources/tohama_I_bpertussis.fasta",
"-ipdbmlst",
"pubmlst_bordetella_seqdef",
"${workspaceFolder}/output"
],
"cwd": "${workspaceFolder}/src",
"env": {
"PYTHONPATH": "${workspaceFolder}/src"
}
}
]
}

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.vscode/settings.json vendored Normal file
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{
"python.testing.unittestEnabled": false,
"python.testing.pytestEnabled": true
}