2025-01-08 15:14:06 +00:00
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import os
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2025-01-08 21:32:10 +00:00
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from automlst.engine.local.abif import read_abif, reference_consensus_assembly
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2025-01-08 15:14:06 +00:00
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async def test_load_sanger_sequence_has_data():
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assert os.path.exists("tests/resources/1I1_F_P1815443_047.ab1")
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result_data = await read_abif("tests/resources/1I1_F_P1815443_047.ab1")
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2025-01-08 21:32:10 +00:00
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assert result_data is not None
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async def test_consensus_assembly_with_ncbi():
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consensus = reference_consensus_assembly("ON685494.1", [await read_abif("tests/resources/1I1_F_P1815443_047.ab1"), await read_abif("tests/resources/1I1_R_P1815443_094.ab1")])
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# TODO complete implementing this
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