Separated CLI from engine bioconda update pipelines

Jenkinsfile

@@ -11,11 +11,10 @@ pipeline {
             parallel {
                 stage("recipes repo") {
                     steps {
-                        sh 'git clone https://github.com/RealYHD/bioconda-recipes.git'
+                        sh 'git clone https://github.com/Syph-and-VPD-Lab/bioconda-recipes.git'
                         dir('bioconda-recipes') {
                             sh 'git pull'
                             sh 'git pull origin update-autobigs-engine'
-                            sh 'git pull origin update-autobigs-cli'
                         }
                     }
                 }
@@ -26,5 +25,28 @@ pipeline {
                 }
             }
         }
+        stage("generate recipe") {
+            steps {
+                sh 'grayskull pypi autobigs.engine --maintainers "Harrison Deng"'
+                sh 'python scripts/adapt_names.py autobigs.engine'
+            }
+        }
+        stage("build") {
+            steps {
+                sh 'conda build autobigs-engine'
+            }
+        }
+        stage("commit") {
+            environment {
+                TOKEN = credentials('github.com')
+            }
+            steps {
+                dir('bioconda-recipes') {
+                    sh 'cp -r ../autobigs-engine/* recipes/autobigs-engine/.'
+                    sh 'git commit -a -m "Automatically updated autobigs-engine bioconda recipe to $(python ../scripts/package_latest_version.py autoBIGS.engine)."'
+                    sh 'git push https://${TOKEN}@github.com/Syph-and-VPD-Lab/bioconda-recipes.git update-autobigs-engine'
+                }
+            }
+        }
     }
 }