8 Commits

Author SHA1 Message Date
d9a16de97e Merge branch 'main' into develop
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2025-02-26 15:25:23 +00:00
19b23539b3 Added bioconda and personal conda repos to channels
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2025-02-26 15:22:32 +00:00
41c05cc521 Increased user friendliness
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Added default MLST scheme
Added multiple ways of defining a MLST scheme
CSV output now shows database name for each scheme ID
Now uses native argparse library for ensuring mutual exclusivity of arguments and whether or not one is required.
Updated to use 0.13.* of engine
2025-02-26 07:37:34 +00:00
6b8376c470 Added publishing to personal git repo
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2025-02-21 06:33:07 +00:00
3aa2916324 Updated pipeline to not publish to system repo if it's a tagged version
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2025-02-19 16:02:31 +00:00
81d63bc54d Updated private git credentials and now fails CI publishing steps 2025-01-24 21:01:14 +00:00
ca59751c35 Now publishing to pypi.org on release 2025-01-17 15:31:14 +00:00
3b2cf916fd Initial commit transfering files over from original automlst.engine project 2025-01-10 21:15:59 +00:00