Updated module imports
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@@ -1,6 +1,6 @@
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from argparse import ArgumentParser, Namespace
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import asyncio
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from autoBIGS.engine.data.remote.databases.bigsdb import BIGSdbIndex
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from autobigs.engine.data.remote.databases.bigsdb import BIGSdbIndex
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def setup_parser(parser: ArgumentParser):
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parser.description = "Fetches the latest BIGSdb MLST database definitions."
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@@ -3,8 +3,8 @@ from importlib import metadata
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from os import path
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import os
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from autoBIGS.cli import info, st
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from autoBIGS.cli.meta import get_module_base_name
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from autobigs.cli import info, st
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from autobigs.cli.meta import get_module_base_name
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import importlib
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root_parser = argparse.ArgumentParser(epilog='Use "%(prog)s info -h" to learn how to get available MLST databases, and their available schemas.'
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@@ -2,9 +2,9 @@
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from argparse import ArgumentParser, Namespace
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import asyncio
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import datetime
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from autoBIGS.engine.data.local.csv import write_mlst_profiles_as_csv
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from autoBIGS.engine.data.local.fasta import read_multiple_fastas
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from autoBIGS.engine.data.remote.databases.bigsdb import BIGSdbIndex
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from autobigs.engine.data.local.csv import write_mlst_profiles_as_csv
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from autobigs.engine.data.local.fasta import read_multiple_fastas
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from autobigs.engine.data.remote.databases.bigsdb import BIGSdbIndex
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def setup_parser(parser: ArgumentParser):
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