Added bioconda and personal conda repos to channels
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2025-02-26 15:22:32 +00:00
parent dbd8238cef
commit 19b23539b3
4 changed files with 30 additions and 7 deletions

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.devcontainer/Dockerfile Normal file
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FROM mcr.microsoft.com/devcontainers/miniconda:1-3
# Copy environment.yml (if found) to a temp location so we update the environment. Also
# copy "noop.txt" so the COPY instruction does not fail if no environment.yml exists.
COPY environment.yml* .devcontainer/noop.txt /tmp/conda-tmp/
RUN if [ -f "/tmp/conda-tmp/environment.yml" ]; then umask 0002 && /opt/conda/bin/conda env update -n base -f /tmp/conda-tmp/environment.yml; fi \
&& rm -rf /tmp/conda-tmp
# [Optional] Uncomment to install a different version of Python than the default
# RUN conda install -y python=3.6 \
# && pip install --no-cache-dir pipx \
# && pipx reinstall-all
# [Optional] Uncomment this section to install additional OS packages.
# RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
# && apt-get -y install --no-install-recommends <your-package-list-here>