Initial commit, copied from autoBIGS.engine-bioconda
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.devcontainer/Dockerfile
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.devcontainer/Dockerfile
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FROM mcr.microsoft.com/devcontainers/miniconda:1-3
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# Copy environment.yml (if found) to a temp location so we update the environment. Also
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# copy "noop.txt" so the COPY instruction does not fail if no environment.yml exists.
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COPY environment.yml* .devcontainer/noop.txt /tmp/conda-tmp/
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RUN if [ -f "/tmp/conda-tmp/environment.yml" ]; then umask 0002 && /opt/conda/bin/conda env update -n base -f /tmp/conda-tmp/environment.yml; fi \
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&& rm -rf /tmp/conda-tmp
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# [Optional] Uncomment to install a different version of Python than the default
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# RUN conda install -y python=3.6 \
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# && pip install --no-cache-dir pipx \
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# && pipx reinstall-all
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# [Optional] Uncomment this section to install additional OS packages.
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# RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
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# && apt-get -y install --no-install-recommends <your-package-list-here>
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